Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006238632.1 | Gene: | Lrp8 / 362558 | RGDID: | 1305729 | Length: | 1013 | Species: | Rattus norvegicus |
Alignment Length: | 776 | Identity: | 285/776 - (36%) |
---|---|---|---|
Similarity: | 407/776 - (52%) | Gaps: | 87/776 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 2728 DMFRCGSGECIPRKFLCDSLKDCRDFSDEKMCAPIPCEKNDMTFVHCGNSTICIMPRWRCDGDPD 2792
Fly 2793 CPDGTDE--LDCANH----TSLSCDPGQFRCASGNCIAGSWHCDGEKDCPDGSDEINCRTECRHN 2851
Fly 2852 QFAC-DKTCIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS 2915
Fly 2916 GLGDEGSEDEGPQCG----GVAHIP-DCPPPAHL-CTSGLCIDSHYVCDGDEDCPGGDDEYEGCV 2974
Fly 2975 PAFQPHSCPGGSLMH--QCQDGLCIFKNQTCDGKPDCGDGSDETSSLCAHTRGCNGTDDFRCKNG 3037
Fly 3038 ACIHADLLCDRRNDCADFSDE--ELC-------------NVNECLIPD-ICEHECEDKVVGYQCH 3086
Fly 3087 CRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYALVDHHT--CKATSNVSME 3149
Fly 3150 LIFSNRYYIRQVDMTGNG-SILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQ- 3212
Fly 3213 -----TLHQAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEYLREPRGIALHP 3272
Fly 3273 YQQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLD 3337
Fly 3338 GNHTRLLLARSINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDL 3402
Fly 3403 RVFHPYRQQQPMSGNPC-LAA----NCSTLCVLSPE----EPYYKCMCPTNFILADDGRTC 3454 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | |||
LDLa | 2671..2702 | CDD:238060 | |||
LDLa | 2727..2759 | CDD:238060 | 15/30 (50%) | ||
LDLa | 2773..2802 | CDD:238060 | 15/30 (50%) | ||
LDLa | 2810..2844 | CDD:238060 | 16/33 (48%) | ||
LDLa | 2848..2878 | CDD:238060 | 12/30 (40%) | ||
LDLa | 2887..2916 | CDD:197566 | 15/28 (54%) | ||
LDLa | 2938..2969 | CDD:197566 | 13/31 (42%) | ||
LDLa | 2989..3015 | CDD:197566 | 12/27 (44%) | ||
LDLa | 3030..3061 | CDD:238060 | 13/32 (41%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 11/29 (38%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 18/39 (46%) | ||
LY | 3212..3254 | CDD:214531 | 19/47 (40%) | ||
LY | 3255..3297 | CDD:214531 | 19/41 (46%) | ||
LY | 3299..3340 | CDD:214531 | 12/40 (30%) | ||
LY | 3354..3389 | CDD:214531 | 12/34 (35%) | ||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
Lrp8 | XP_006238632.1 | LDLa | 44..78 | CDD:238060 | 15/30 (50%) |
LDLa | 82..114 | CDD:197566 | 16/35 (46%) | ||
LDLa | 124..160 | CDD:238060 | 18/40 (45%) | ||
LDLa | 203..235 | CDD:197566 | 16/36 (44%) | ||
LDLa | 256..289 | CDD:238060 | 14/33 (42%) | ||
LDLa | 295..329 | CDD:238060 | 14/35 (40%) | ||
LDLa | 333..369 | CDD:294076 | 15/35 (43%) | ||
FXa_inhibition | 390..424 | CDD:291342 | 11/35 (31%) | ||
EGF_CA | 426..456 | CDD:214542 | 15/29 (52%) | ||
LY | 495..530 | CDD:214531 | 14/38 (37%) | ||
LY | 540..581 | CDD:214531 | 19/40 (48%) | ||
Ldl_recept_b | 602..642 | CDD:278487 | 15/39 (38%) | ||
LY | 626..668 | CDD:214531 | 12/41 (29%) | ||
Ldl_recept_b | 689..728 | CDD:278487 | 9/38 (24%) | ||
FXa_inhibition | 747..784 | CDD:291342 | 11/36 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |