Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
Alignment Length: | 2033 | Identity: | 550/2033 - (27%) |
---|---|---|---|
Similarity: | 901/2033 - (44%) | Gaps: | 298/2033 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 743 WTSHKKM----QVAPLR--NLSKVLTFNTDCDAMSLELDPTTGLLYWSQWESQSCEAGIYSSWMD 801
Fly 802 GTH--------KELLAKGTSSMPMQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGREVLFKS 858
Fly 859 DQFHPYSIVQNNGLIYWADNKNSTILRFHAHQANLSSTFSSTVHLQRTGRAADLRIFDIASQPLP 923
Fly 924 QTPSACAQSKCPGMCLNTPKGAICRCPDGFTLNGTGSHCIPQLAPSP-IRPNCTS---GYMCRST 984
Fly 985 RQCLDTKDMCDGFEDCEDGIDESSDPKGPCNVNTCDKTHNFVC-NGRCYQRSLLCSTIPYCSDGT 1048
Fly 1049 DQANCHQNTCNSNEFTCHKSGRCIQLTWVNDGVVDCGPDDDSDETSETIFASKCP--EFDCN--- 1108
Fly 1109 ------NGRCRQFADVCDGIDNCGNNADEMECEQE---CEHGEKYCRPIGCYGEMHMCDGIHDCL 1164
Fly 1165 DFSDEANCNQTKSDNHPVTEWKELGECAPLEFACMFPFECIPDFLRCDGISHCFDKTDEFNCTHI 1229
Fly 1230 NTTRFDMNETVICEHPDRLCGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHECSHRCH 1294
Fly 1295 NTPEG-YICSCPDHLYLQPNGKRCSMQHACDHWDT--CSQVCESSGKGYDCRCLDGFDLGFDRFT 1356
Fly 1357 CKSTAPDEPYVIFTNRQDIKGINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIY 1421
Fly 1422 RGHLVGESLRNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMES 1486
Fly 1487 PRAIALDPREGLLFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAG--WPNGLTLDYTQKRVYW 1549
Fly 1550 VDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQVL 1614
Fly 1615 QRTQSQPFGIQVLHSSRQPWDRNPCGEN----NGGCSHLCLLSGRGTFKCECPHVMRLDPANERN 1675
Fly 1676 CVPNEQVLLFVMVDE---IRGIDLHQPNHHTIPTIRQSPRLVAPQRIDFLVDESRIFWSDIQQNE 1737
Fly 1738 ISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFAS-IIHEDLNM 1801
Fly 1802 VDSIVLDPANGKMYWIHSASD-GSMSQLEQSNLDG------SSRSLIYQHENNLQSLTMDFDSQR 1859
Fly 1860 LYYA-----------YDNSGIAYYDIPRNETRKVL---VASPITSISSLTVYNGTLYFPENIQSV 1910
Fly 1911 IMQCEKEACSNMSYLRVNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQQLCLATSSIDHVCRCA 1975
Fly 1976 LGYDVEPNNPTGCVPRAEFIFYS--IDVLQGVEMIDPSEQFDTPSPALVPISRVSSASFIDYLAN 2038
Fly 2039 TDTLYWGDNELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIE 2103
Fly 2104 VARLDGSHRYVVV-SNLEKPTALAVDPLQGLLFYVTQQH---IGRVGLDGSQPFVLVNQTRANWA 2164
Fly 2165 VGSLVLDIEATKVYWCERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEGI 2229
Fly 2230 IRVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGS--NPCAHSNGACEQLCLFNGTSAVCACA 2292
Fly 2293 HS-RLASDGYS-CEPY-ENFLLFSYRSNIE--SIHMTDHADKNWPVQMISNTSLMRNVIAITYNY 2352
Fly 2353 EEQLVYYSDVQLSTINQVH-FNGTGHRVLLEQQQRV-EGLAYDIVNEQLFWTSNNNATIRSVELR 2415
Fly 2416 HLSEHADQNQVHVKKVLSLREDD--KPRGIAVEPCLGMIYWTNWNEGSPC-IQRSYLTGYGTEVI 2477
Fly 2478 IKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGDLLFWTD 2542
Fly 2543 WVLHAVVRANKYTGT---DVLFLREHVTRPMGIVAVQNTSINCDANQCKILNGQCEDVCILNKSG 2604
Fly 2605 QATCHCTQGVLAPDGRRCIAPVNTSCG---------------LSQYNCHS-GECIPLELTCDNVT 2653
Fly 2654 HCADG----SDEFRSYCI 2667 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | 7/34 (21%) | ||
LDLa | 1057..1092 | CDD:197566 | 15/34 (44%) | ||
LDLa | 1104..1134 | CDD:238060 | 12/38 (32%) | ||
FXa_inhibition | 1289..1317 | CDD:291342 | 7/28 (25%) | ||
LY | 1434..1476 | CDD:214531 | 16/41 (39%) | ||
LY | 1477..1521 | CDD:214531 | 19/43 (44%) | ||
LY | 1533..1567 | CDD:214531 | 16/35 (46%) | ||
LY | 1568..1611 | CDD:214531 | 18/42 (43%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 13/40 (33%) | ||
LY | 1794..1838 | CDD:214531 | 16/50 (32%) | ||
LY | 2078..2112 | CDD:214531 | 15/33 (45%) | ||
NHL | <2082..>2152 | CDD:302697 | 33/73 (45%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 17/38 (45%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 12/35 (34%) | ||
LY | 2430..2471 | CDD:214531 | 15/43 (35%) | ||
LY | 2475..2517 | CDD:214531 | 16/41 (39%) | ||
LDLa | 2630..2661 | CDD:238060 | 11/50 (22%) | ||
LDLa | 2671..2702 | CDD:238060 | |||
LDLa | 2727..2759 | CDD:238060 | |||
LDLa | 2773..2802 | CDD:238060 | |||
LDLa | 2810..2844 | CDD:238060 | |||
LDLa | 2848..2878 | CDD:238060 | |||
LDLa | 2887..2916 | CDD:197566 | |||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 10/33 (30%) |
LDLa | 306..340 | CDD:238060 | 16/36 (44%) | ||
LDLa | 347..390 | CDD:238060 | 14/42 (33%) | ||
LDLa | 397..431 | CDD:238060 | 10/33 (30%) | ||
LDLa | 442..476 | CDD:238060 | 12/34 (35%) | ||
LDLa | 480..521 | CDD:238060 | 13/42 (31%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 9/27 (33%) | ||
LY | 634..671 | CDD:214531 | 12/39 (31%) | ||
NHL | <656..793 | CDD:302697 | 57/145 (39%) | ||
LY | 680..714 | CDD:214531 | 13/33 (39%) | ||
NHL repeat | 681..722 | CDD:271320 | 14/40 (35%) | ||
NHL repeat | 726..760 | CDD:271320 | 19/34 (56%) | ||
LY | 761..803 | CDD:214531 | 18/46 (39%) | ||
NHL repeat | 769..793 | CDD:271320 | 11/23 (48%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 12/31 (39%) | ||
LY | 946..985 | CDD:214531 | 9/38 (24%) | ||
NHL | <967..1142 | CDD:302697 | 47/199 (24%) | ||
LY | 988..1030 | CDD:214531 | 10/42 (24%) | ||
NHL repeat | 998..1037 | CDD:271320 | 10/39 (26%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 14/45 (31%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 8/50 (16%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 10/37 (27%) | ||
NHL | 1260..>1445 | CDD:302697 | 67/194 (35%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 9/41 (22%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 16/34 (47%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 14/37 (38%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 8/25 (32%) | ||
LY | 1600..1640 | CDD:214531 | 8/42 (19%) | ||
LY | 1643..1686 | CDD:214531 | 17/53 (32%) | ||
LY | 1688..1729 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 9/30 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45461701 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |