Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017448147.1 | Gene: | Lrp6 / 312781 | RGDID: | 1304749 | Length: | 1613 | Species: | Rattus norvegicus |
Alignment Length: | 1762 | Identity: | 512/1762 - (29%) |
---|---|---|---|
Similarity: | 780/1762 - (44%) | Gaps: | 342/1762 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1365 PYVIFTNRQDIK------GINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRG 1423
Fly 1424 HLVGESLRNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPR 1488
Fly 1489 AIALDPREGLLFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAK 1553
Fly 1554 SDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQVLQRTQ 1618
Fly 1619 SQPFGIQVLHSSRQPWDRNPCGENNGGCSHLCLLSG-RGTFKCECPHVMRL--------DPANER 1674
Fly 1675 NCVPNEQVLLFVMVDEIRGIDLHQPNHHTIPTIRQSPRLVAPQRIDFLVDESRIFWSDIQQNEIS 1739
Fly 1740 SAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFS-SGQIKCNILASNLKGEFASI-IHEDLNMV 1802
Fly 1803 DSIVLDPANGKMYWIHSASD-GSMSQLEQSNLDGSSRSLIYQHENNL---QSLTMDFDSQRLYYA 1863
Fly 1864 -----------YDNSGIAYYDIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKE 1917
Fly 1918 ACSNMSYLRVNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQQLCLATSSIDHVCRCALGYDVEP 1982
Fly 1983 NNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFDTPSPAL--------VPISRVSSASFIDYLANT 2039
Fly 2040 DTLYWGDNELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEV 2104
Fly 2105 ARLDGSHRYVVV-SNLEKPTALAVDPLQGLLFYVT---QQHIGRVGLDGSQPFVLV-NQTRANWA 2164
Fly 2165 VGSLVLDIEATKVYWCERYPDALMKVDYDGNLRE---------QLLNESLNNPVALAKMGDYLYW 2220
Fly 2221 AENKYNEGIIRVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGT 2285
Fly 2286 SA-VCAC-AHSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWPVQMISNTSLMRNVIAI 2348
Fly 2349 TYNYEEQLVYYSDVQLSTINQVHFN-GTGHRVLLEQ--QQRVE----GLAYDIVNEQLFWTSNNN 2406
Fly 2407 ATIRSVELRHLSEHADQNQVHVKKVLSLREDDKPRGIAVEPCLGMIYWTNWNEGSPCIQRSYLTG 2471
Fly 2472 YGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGD 2536
Fly 2537 LLFWTDWVLHAVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSINC---------DANQCKILNG 2592
Fly 2593 QCEDVCILNKSGQATCHCTQG-VLAPDGRRCIAPVNTSCGLSQYNCHSG--ECIPLELTCDNVTH 2654
Fly 2655 CADGSDEFRSYCIFRQCPETHFMCQNHRCIPKEHKCDGEQQCGDGSDE--TPLLCKCQSEDIDMH 2717
Fly 2718 PSNNNTKEMPDMFRCGSGECIPRKFLCDSLKDCRDFSDEKMC----APIPCEKNDM--------- 2769
Fly 2770 TFVHCGNSTIC---IMPRWRCDGDPDCPD------GTDELDCANH-TSLSCD-PGQFRCASGNCI 2823
Fly 2824 AGSWHCDGEKDCPDGSDEINCRTECRHNQFACDKTCIPASWQCDGKSDCEDGSDEGPQCP----- 2883
Fly 2884 -------------------NRPC-------RPHLFQ--------CKSSGRCIPQKWVCDGEKDCP 2914
Fly 2915 S----------GLGDEGSEDEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDE 2969
Fly 2970 YEGCVPA 2976 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | 21/41 (51%) | ||
LY | 1477..1521 | CDD:214531 | 21/43 (49%) | ||
LY | 1533..1567 | CDD:214531 | 17/33 (52%) | ||
LY | 1568..1611 | CDD:214531 | 18/42 (43%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 19/45 (42%) | ||
LY | 1794..1838 | CDD:214531 | 21/45 (47%) | ||
LY | 2078..2112 | CDD:214531 | 17/33 (52%) | ||
NHL | <2082..>2152 | CDD:302697 | 33/73 (45%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 20/38 (53%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 16/35 (46%) | ||
LY | 2430..2471 | CDD:214531 | 19/40 (48%) | ||
LY | 2475..2517 | CDD:214531 | 15/41 (37%) | ||
LDLa | 2630..2661 | CDD:238060 | 13/32 (41%) | ||
LDLa | 2671..2702 | CDD:238060 | 11/30 (37%) | ||
LDLa | 2727..2759 | CDD:238060 | 14/31 (45%) | ||
LDLa | 2773..2802 | CDD:238060 | 8/37 (22%) | ||
LDLa | 2810..2844 | CDD:238060 | 7/34 (21%) | ||
LDLa | 2848..2878 | CDD:238060 | 4/29 (14%) | ||
LDLa | 2887..2916 | CDD:197566 | 8/53 (15%) | ||
LDLa | 2938..2969 | CDD:197566 | 4/30 (13%) | ||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
Lrp6 | XP_017448147.1 | NHL | 55..272 | CDD:302697 | 92/227 (41%) |
NHL repeat | 55..93 | CDD:271320 | 12/42 (29%) | ||
LY | 89..127 | CDD:214531 | 19/37 (51%) | ||
NHL repeat | 97..132 | CDD:271320 | 18/34 (53%) | ||
NHL repeat | 140..176 | CDD:271320 | 21/36 (58%) | ||
Ldl_recept_b | 150..190 | CDD:278487 | 20/43 (47%) | ||
LY | 175..216 | CDD:214531 | 18/43 (42%) | ||
NHL repeat | 181..217 | CDD:271320 | 17/35 (49%) | ||
NHL repeat | 226..253 | CDD:271320 | 14/26 (54%) | ||
FXa_inhibition | 286..323 | CDD:291342 | 16/36 (44%) | ||
LY | 353..393 | CDD:214531 | 8/39 (21%) | ||
LY | 397..437 | CDD:214531 | 14/41 (34%) | ||
LY | 438..481 | CDD:214531 | 21/46 (46%) | ||
LY | 483..524 | CDD:214531 | 7/53 (13%) | ||
LY | 525..558 | CDD:214531 | 8/32 (25%) | ||
FXa_inhibition | 592..627 | CDD:291342 | 12/37 (32%) | ||
LY | 656..694 | CDD:214531 | 12/37 (32%) | ||
LY | 697..739 | CDD:214531 | 20/48 (42%) | ||
LY | 740..783 | CDD:214531 | 15/42 (36%) | ||
LY | 783..825 | CDD:214531 | 15/55 (27%) | ||
LY | 827..866 | CDD:214531 | 10/41 (24%) | ||
FXa_inhibition | 893..929 | CDD:291342 | 16/35 (46%) | ||
LY | 958..998 | CDD:214531 | 10/39 (26%) | ||
LY | 1001..1048 | CDD:214531 | 11/53 (21%) | ||
Ldl_recept_b | 1069..1110 | CDD:278487 | 16/40 (40%) | ||
LY | 1094..1136 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 1207..1243 | CDD:291342 | 11/35 (31%) | ||
LDLa | 1249..1285 | CDD:238060 | 15/37 (41%) | ||
LDLa | 1288..1322 | CDD:238060 | 13/33 (39%) | ||
LDLa | 1326..1360 | CDD:238060 | 15/51 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |