Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099791.2 | Gene: | Lrp5 / 293649 | RGDID: | 1309329 | Length: | 1600 | Species: | Rattus norvegicus |
Alignment Length: | 1759 | Identity: | 512/1759 - (29%) |
---|---|---|---|
Similarity: | 760/1759 - (43%) | Gaps: | 337/1759 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1357 CKSTAP--DEPYVIFTNRQDIK-----GINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTD 1414
Fly 1415 VIDDKIYRGHL--VGESLRNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRR 1477
Fly 1478 TLIAGNMESPRAIALDPREGLLFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDY 1542
Fly 1543 TQKRVYWVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWN 1607
Fly 1608 GSDVQVLQRTQSQPFGIQVLHSSRQPWDRNPCGENNGGCSHLCLLSGRGTF-KCECPHVMRLDPA 1671
Fly 1672 NERNCVPN-EQVLLFVMVDEIRGIDLHQPNHHTIPTIRQSPRLVAPQRIDFLVDESRIFWSDIQQ 1735
Fly 1736 NEISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFS-SGQIKCNILASNLKGEFASI-IHED 1798
Fly 1799 LNMVDSIVLDPANGKMYWIHSASD-GSMSQLEQSNLDGSSRSLIYQHENNL---QSLTMDFDSQR 1859
Fly 1860 LYYA---YDNSGIAYYDIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKEACSN 1921
Fly 1922 ----------MSYLRVNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQQLCLATSSIDHV--CRC 1974
Fly 1975 ALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFDTPSPALVPISRVSSASFIDYLANT 2039
Fly 2040 DTLYWGDNELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEV 2104
Fly 2105 ARLDGSHRYVVV-SNLEKPTALAVDPLQGLLFYVT---QQHIGRVGLDGSQPFVLVNQT-RANWA 2164
Fly 2165 VGSLVLDIEATKVYWCERYPDALMKVDYDGNLRE---------QLLNESLNNPVALAKMGDYLYW 2220
Fly 2221 AENKYNEGIIRVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGT 2285
Fly 2286 SAVCACA-HSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWPVQMISNTSLMRNVIAIT 2349
Fly 2350 YNYEEQLVYYSDVQLSTINQVHFNGTGHRVL------LEQQQRVEGLAYDIVNEQLFWTSNNNAT 2408
Fly 2409 IRSVELRHLSEHADQNQVHVKKVLSLRED-DKPRGIAVEPCLGMIYWTNWNEGSPCIQRSYLTGY 2472
Fly 2473 GTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGDL 2537
Fly 2538 LFWTDWVLHAVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSI-NCDANQCKILNGQCEDVCILN 2601
Fly 2602 KSGQATCHC-TQGVLAPDGRRCIAPVNTSCGLSQYNCHSGE--CIPLELTCDNVTHCADGSDEFR 2663
Fly 2664 SYCIFRQCP---ETHFMCQNHRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKE 2725
Fly 2726 MPDMFRCGSGECIPRKFLCDSLKDCRDFSDEKMCA-------PIPCEKNDM---------TFVHC 2774
Fly 2775 GNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSWHCDGEKDCPDGS 2839
Fly 2840 DEINCRTECRHNQFACDKTCIPASWQCDGKSDCEDGSDEGPQCPNRPC----------------- 2887
Fly 2888 ----RPHLFQCKSSGRCIPQKWVCDGEKDCPSGLGDEGSEDEGPQCGGV-----AHIPD------ 2937
Fly 2938 ------CPPPAHLCTSGLCID---------SHYVCDGDEDCPGGDDEYEGCVPAFQPH------- 2980
Fly 2981 -SCP 2983 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | 23/41 (56%) | ||
LY | 1477..1521 | CDD:214531 | 22/43 (51%) | ||
LY | 1533..1567 | CDD:214531 | 16/33 (48%) | ||
LY | 1568..1611 | CDD:214531 | 17/42 (40%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 20/37 (54%) | ||
LY | 1794..1838 | CDD:214531 | 19/45 (42%) | ||
LY | 2078..2112 | CDD:214531 | 19/33 (58%) | ||
NHL | <2082..>2152 | CDD:302697 | 32/73 (44%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 21/38 (55%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 15/34 (44%) | ||
LY | 2430..2471 | CDD:214531 | 16/41 (39%) | ||
LY | 2475..2517 | CDD:214531 | 16/41 (39%) | ||
LDLa | 2630..2661 | CDD:238060 | 14/32 (44%) | ||
LDLa | 2671..2702 | CDD:238060 | 7/33 (21%) | ||
LDLa | 2727..2759 | CDD:238060 | 17/31 (55%) | ||
LDLa | 2773..2802 | CDD:238060 | 2/28 (7%) | ||
LDLa | 2810..2844 | CDD:238060 | 4/33 (12%) | ||
LDLa | 2848..2878 | CDD:238060 | 4/29 (14%) | ||
LDLa | 2887..2916 | CDD:197566 | 6/49 (12%) | ||
LDLa | 2938..2969 | CDD:197566 | 8/39 (21%) | ||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
Lrp5 | NP_001099791.2 | NHL | <37..>169 | CDD:302697 | 57/140 (41%) |
NHL repeat | 65..104 | CDD:271320 | 13/44 (30%) | ||
LY | 102..142 | CDD:214531 | 23/39 (59%) | ||
NHL repeat | 107..148 | CDD:271320 | 23/40 (58%) | ||
Ldl_recept_b | 163..203 | CDD:278487 | 22/43 (51%) | ||
LY | 187..229 | CDD:214531 | 18/44 (41%) | ||
LY | 230..271 | CDD:214531 | 17/42 (40%) | ||
FXa_inhibition | 299..336 | CDD:291342 | 20/37 (54%) | ||
LY | 366..406 | CDD:214531 | 8/39 (21%) | ||
LY | 408..450 | CDD:214531 | 16/43 (37%) | ||
LY | 451..494 | CDD:214531 | 19/46 (41%) | ||
LY | 495..537 | CDD:214531 | 7/46 (15%) | ||
LY | 538..571 | CDD:214531 | 5/32 (16%) | ||
FXa_inhibition | 605..640 | CDD:291342 | 12/39 (31%) | ||
NHL | 685..878 | CDD:302697 | 67/216 (31%) | ||
LY | 710..752 | CDD:214531 | 22/48 (46%) | ||
NHL repeat | 720..756 | CDD:271320 | 20/35 (57%) | ||
NHL repeat | 763..802 | CDD:271320 | 12/38 (32%) | ||
NHL repeat | 808..843 | CDD:271320 | 8/44 (18%) | ||
NHL repeat | 847..871 | CDD:271320 | 8/25 (32%) | ||
FXa_inhibition | 906..941 | CDD:291342 | 15/34 (44%) | ||
LY | 1060..1103 | CDD:214531 | 18/46 (39%) | ||
LY | 1104..1146 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 1217..1253 | CDD:291342 | 11/35 (31%) | ||
LDLa | 1259..1295 | CDD:238060 | 16/42 (38%) | ||
LDLa | 1321..1355 | CDD:238060 | 18/51 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |