DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRP1 and F32E10.8

DIOPT Version :10

Sequence 1:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster
Sequence 2:NP_501228.1 Gene:F32E10.8 / 260105 WormBaseID:WBGene00017995 Length:134 Species:Caenorhabditis elegans


Alignment Length:99 Identity:40/99 - (40%)
Similarity:46/99 - (46%) Gaps:20/99 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  2769 MTFVHCGNSTICIMPRWRCDGDPDCPDGTDELD--CANHTS------------LSCDPGQFRCA- 2818
            :|.:.|.:...||...|.|||..||||.:|||.  |....|            |.|....|||. 
 Worm    30 LTHIRCFDQLTCIRKSWMCDGKIDCPDHSDELPNICLKRNSYNKLQLQDVSVGLKCPSFWFRCTD 94

  Fly  2819 SGNCIAGSWHCDGEKDCPDGSDEINCRTECRHNQ 2852
            |.:|||.:..||..|||.|||||   |..|  ||
 Worm    95 SSSCIAPNRVCDKYKDCRDGSDE---RENC--NQ 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:459654
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060
LDLa 1191..1226 CDD:238060
FXa_inhibition 1289..1317 CDD:464251
LY 1434..1476 CDD:214531
LY 1477..1521 CDD:214531
LY 1533..1567 CDD:214531
LY 1568..1611 CDD:214531
FXa_inhibition 1639..1676 CDD:464251
LY 1751..1789 CDD:214531
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:464251
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060
LDLa 2671..2702 CDD:238060
LDLa 2727..2759 CDD:238060
LDLa 2773..2802 CDD:238060 14/30 (47%)
LDLa 2810..2844 CDD:238060 18/34 (53%)
LDLa 2848..2878 CDD:238060 3/5 (60%)
LDLa 2887..2916 CDD:197566
LDLa 2938..2969 CDD:197566
LDLa 2989..3015 CDD:197566
LDLa 3030..3061 CDD:238060
EGF_CA 3062..>3091 CDD:214542
EGF_CA 3103..3141 CDD:214542
LY 3212..3254 CDD:214531
Ldl_recept_b 3275..3314 CDD:459654
LY 3299..3340 CDD:214531
LY 3354..3389 CDD:214531
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
YncE 3935..4148 CDD:442618
LY 4108..4150 CDD:214531
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
F32E10.8NP_501228.1 LDLa <40..61 CDD:238060 11/20 (55%)
LDLa 84..117 CDD:197566 16/32 (50%)
Blue background indicates that the domain is not in the aligned region.

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