Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032539.2 | Gene: | Lrp5 / 16973 | MGIID: | 1278315 | Length: | 1614 | Species: | Mus musculus |
Alignment Length: | 1741 | Identity: | 516/1741 - (29%) |
---|---|---|---|
Similarity: | 760/1741 - (43%) | Gaps: | 312/1741 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1361 APDEPYVIFTNRQDIK-----GINLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKI 1420
Fly 1421 YRGHL--VGESLRNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGN 1483
Fly 1484 MESPRAIALDPREGLLFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVY 1548
Fly 1549 WVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQV 1613
Fly 1614 LQRTQSQPFGIQVLHSSRQPWDRNPCGENNGGCSHLCLLSGRGTF-KCECPHVMRLDPANERNCV 1677
Fly 1678 PN-EQVLLFVMVDEIRGIDLHQPNHHTIPTIRQSPRLVAPQRIDFLVDESRIFWSDIQQNEISSA 1741
Fly 1742 GISNGLIEPIINTNIEKPYGFAVDWIARNMYFS-SGQIKCNILASNLKGEFASI-IHEDLNMVDS 1804
Fly 1805 IVLDPANGKMYWIHSASD-GSMSQLEQSNLDGSSRSLIYQHENNL---QSLTMDFDSQRLYYA-- 1863
Fly 1864 -YDNSGIAYYDIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKEACSN------ 1921
Fly 1922 ----MSYLRVNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQQLCLATSSIDHVCRCALGYDVEP 1982
Fly 1983 NNPTGCVPRAEFIFYSIDVLQGVEMIDPSEQFDTPSPALVPISRVSSASFIDYLANTDTLYWGDN 2047
Fly 2048 ELGSISRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHR 2112
Fly 2113 YVVV-SNLEKPTALAVDPLQGLLFYVT---QQHIGRVGLDGSQPFVLVNQT-RANWAVGSLVLDI 2172
Fly 2173 EATKVYWCERYPDALMKVDYDGNLRE---------QLLNESLNNPVALAKMGDYLYWAENKYNEG 2228
Fly 2229 IIRVAPLANLSQSKVVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLFNGTSAVCACA- 2292
Fly 2293 HSRLASDGYSCEPYENFLLFSYRSNIESIHMTDHADKNWPVQMISNTSLMRNVIAITYNYEEQLV 2357
Fly 2358 YYSDVQLSTINQVHFNGTGHRVL------LEQQQRVEGLAYDIVNEQLFWTSNNNATIRSVELRH 2416
Fly 2417 LSEHADQNQVHVKKVLSLRED-DKPRGIAVEPCLGMIYWTNWNEGSPCIQRSYLTGYGTEVIIKT 2480
Fly 2481 DIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGDLLFWTDWVL 2545
Fly 2546 HAVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSI-NCDANQCKILNGQCEDVCILNKSGQATCH 2609
Fly 2610 C-TQGVLAPDGRRCIAPVNTSCGLSQYNCHSGE--CIPLELTCDNVTHCADGSDEFRSYCIFRQC 2671
Fly 2672 P---ETHFMCQNHRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCG 2733
Fly 2734 SGECIPRKFLCDSLKDCRDFSDEKMCA-------PIPCEKNDM---------TFVHCGNSTICIM 2782
Fly 2783 PRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSWHCDGEKDCPDGSDEINCRTE 2847
Fly 2848 CRHNQF---ACDKTCIPASWQCDGK-----------------------------------SDCED 2874
Fly 2875 GS--------DEGPQCPNRPCRPHLFQ--------CK--------SSGRCIPQKWVCD------- 2908
Fly 2909 -------------GEKDCPSGLGDEGSEDEGPQCGGVAHIPDCPPPAHLCT 2946 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | 23/41 (56%) | ||
LY | 1477..1521 | CDD:214531 | 22/43 (51%) | ||
LY | 1533..1567 | CDD:214531 | 16/33 (48%) | ||
LY | 1568..1611 | CDD:214531 | 17/42 (40%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 20/37 (54%) | ||
LY | 1794..1838 | CDD:214531 | 19/45 (42%) | ||
LY | 2078..2112 | CDD:214531 | 19/33 (58%) | ||
NHL | <2082..>2152 | CDD:302697 | 32/73 (44%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 21/38 (55%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 15/34 (44%) | ||
LY | 2430..2471 | CDD:214531 | 17/41 (41%) | ||
LY | 2475..2517 | CDD:214531 | 16/41 (39%) | ||
LDLa | 2630..2661 | CDD:238060 | 14/32 (44%) | ||
LDLa | 2671..2702 | CDD:238060 | 12/33 (36%) | ||
LDLa | 2727..2759 | CDD:238060 | 17/31 (55%) | ||
LDLa | 2773..2802 | CDD:238060 | 2/28 (7%) | ||
LDLa | 2810..2844 | CDD:238060 | 7/33 (21%) | ||
LDLa | 2848..2878 | CDD:238060 | 8/75 (11%) | ||
LDLa | 2887..2916 | CDD:197566 | 10/64 (16%) | ||
LDLa | 2938..2969 | CDD:197566 | 5/9 (56%) | ||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
Lrp5 | NP_032539.2 | Beta-propeller 1 | 31..287 | 109/270 (40%) | |
NHL | <36..>168 | CDD:302697 | 57/140 (41%) | ||
NHL repeat | 64..103 | CDD:271320 | 13/44 (30%) | ||
LY | 101..141 | CDD:214531 | 23/39 (59%) | ||
NHL repeat | 106..147 | CDD:271320 | 23/40 (58%) | ||
Ldl_recept_b | 162..202 | CDD:278487 | 22/43 (51%) | ||
LY | 186..228 | CDD:214531 | 18/44 (41%) | ||
LY | 229..270 | CDD:214531 | 17/42 (40%) | ||
LDL-receptor class B 5 | 247..289 | 16/41 (39%) | |||
FXa_inhibition | 298..335 | CDD:291342 | 20/37 (54%) | ||
Beta-propeller 2 | 340..601 | 72/284 (25%) | |||
LY | 365..405 | CDD:214531 | 8/39 (21%) | ||
LY | 407..449 | CDD:214531 | 16/43 (37%) | ||
LY | 450..493 | CDD:214531 | 19/46 (41%) | ||
LY | 494..536 | CDD:214531 | 7/46 (15%) | ||
LY | 537..570 | CDD:214531 | 6/32 (19%) | ||
FXa_inhibition | 604..639 | CDD:291342 | 11/37 (30%) | ||
Beta-propeller 3 | 643..902 | 79/288 (27%) | |||
NHL | 684..877 | CDD:302697 | 67/216 (31%) | ||
LY | 709..751 | CDD:214531 | 22/48 (46%) | ||
NHL repeat | 719..755 | CDD:271320 | 20/35 (57%) | ||
NHL repeat | 762..801 | CDD:271320 | 12/38 (32%) | ||
NHL repeat | 807..842 | CDD:271320 | 8/44 (18%) | ||
NHL repeat | 846..870 | CDD:271320 | 8/25 (32%) | ||
FXa_inhibition | 905..940 | CDD:291342 | 15/34 (44%) | ||
Beta-propeller 4 | 944..1211 | 85/282 (30%) | |||
LY | 969..1008 | CDD:214531 | 10/39 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1002..1025 | 4/22 (18%) | |||
LY | 1059..1102 | CDD:214531 | 19/46 (41%) | ||
LY | 1103..1145 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 1216..1252 | CDD:291342 | 11/35 (31%) | ||
LDLa | 1258..1294 | CDD:238060 | 16/42 (38%) | ||
LDLa | 1297..1331 | CDD:238060 | 12/33 (36%) | ||
LDLa | 1335..1369 | CDD:238060 | 18/49 (37%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1474..1498 | 0/23 (0%) | |||
PPPSP motif A | 1499..1505 | 1/5 (20%) | |||
PPPSP motif B | 1537..1544 | 1/6 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1567..1599 | 6/40 (15%) | |||
PPPSP motif C | 1573..1580 | 0/6 (0%) | |||
PPPSP motif D | 1590..1595 | 1/4 (25%) | |||
PPPSP motif E | 1604..1611 | 3/6 (50%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |