DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRP1 and LOC100536757

DIOPT Version :10

Sequence 1:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster
Sequence 2:XP_021334054.3 Gene:LOC100536757 / 100536757 -ID:- Length:600 Species:Danio rerio


Alignment Length:612 Identity:173/612 - (28%)
Similarity:269/612 - (43%) Gaps:121/612 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1101 KCP--EFDCNNGRCRQFADVCDGIDNCGNNADEMECEQECEHGEKYC-RPIGCYGEMHMCDGIHD 1162
            ||.  :|.|.|.||...:..||.:::||:.:||:.| ..|.:|..:| ....|.....:|||..|
Zfish    37 KCTVLQFVCANSRCVSLSSRCDAVNDCGDGSDEISC-WNCTNGSFHCVASESCVSSSSVCDGRPD 100

  Fly  1163 CLDFSDEA--NCNQTKSDNHPVTEWKELGECAPLEFACMFPFECIPDFLRCDGISHCFDKTDEFN 1225
            |.|.:||.  .|          |.:.:...||..||.|. ..:|:|:..|||..|.|.|.:||.:
Zfish   101 CADGADEQLDTC----------TSFSQAQPCARSEFTCT-NGQCVPNSWRCDHSSDCKDGSDEED 154

  Fly  1226 CTHINTTRFDMNETVICEHPDRLCGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHECS 1290
            |.|                                     |:|  ..:.|            .||
Zfish   155 CDH-------------------------------------NEC--AVNNG------------GCS 168

  Fly  1291 HRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRF 1355
            |.|.:.|.|:.|.||..:.|..: ..|.:...|...|.|.|:|..|.....|.|.||:.|.....
Zfish   169 HTCIDLPFGFRCDCPKGMRLVQD-THCEVVDQCLDADVCDQICVHSNGSVVCDCQDGYQLTAGTG 232

  Fly  1356 TCKSTAPDEPYVIFTNRQDIKGINL---KTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVID 1417
            .|::|. ...:|..:.::.||.::|   :..|:.:...|...:.||     |..|. :||:...:
Zfish   233 QCRATG-GLAHVAVSTQEGIKMMDLSGSEERNITDKRLSPGPVSAL-----NAHNT-LYWSSPEN 290

  Fly  1418 DKIYRGHLVGESLRNVEAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAG 1482
            |.|||..|  :|..:..||.........||||||:.::||||.::...:.:|.|..:.:|.||:|
Zfish   291 DIIYRMSL--DSGDHRPAVWLKASKGIVGLAVDWIHESLYWISTSTRALHMASLKNTKQRLLISG 353

  Fly  1483 NMESPRAIALDPREGLLFWTDWDDNSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRV 1547
             :..|.|:|:.|..|.:||.:..: |.||||..:.|:.|..:..|:..:   |..::||..:..:
Zfish   354 -LSKPTAVAVQPLLGYVFWAEGGE-SARIERVGLDGESRFALVVSFVRN---PVAISLDIPRGLL 413

  Fly  1548 YWVDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQ 1612
            ||.|:...|||..::||.....|:.:...|..||.:::||:.|||:|..|.|:..|:|.||:.::
Zfish   414 YWADSGLRSISRVLFDGQYRKTVVESNGYLDQPFGLAIFESRVYWSDQLTNSICSADKHNGTMLR 478

  Fly  1613 VLQRTQS-QPFGIQVLHSSRQPWDR--NPCGENNGGCSHLCLLSGRGTFKCECPHVMRLDPANER 1674
            |.||..| .|.|:.:||...||.|:  :|        |.:...|.:           .|.|:..:
Zfish   479 VPQRLGSASPAGLVILHPLLQPADKVLSP--------SEIKTSSNK-----------ELLPSETK 524

  Fly  1675 NCVPNEQ-------------VLLFVMV 1688
            ..:|:.|             ||||.:|
Zfish   525 TALPDSQFTLMLTLIAVILSVLLFGLV 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:459654
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060 11/29 (38%)
LDLa 1191..1226 CDD:238060 15/34 (44%)
FXa_inhibition 1289..1317 CDD:464251 10/27 (37%)
LY 1434..1476 CDD:214531 14/41 (34%)
LY 1477..1521 CDD:214531 17/43 (40%)
LY 1533..1567 CDD:214531 11/33 (33%)
LY 1568..1611 CDD:214531 16/42 (38%)
FXa_inhibition 1639..1676 CDD:464251 4/36 (11%)
LY 1751..1789 CDD:214531
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:464251
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060
LDLa 2671..2702 CDD:238060
LDLa 2727..2759 CDD:238060
LDLa 2773..2802 CDD:238060
LDLa 2810..2844 CDD:238060
LDLa 2848..2878 CDD:238060
LDLa 2887..2916 CDD:197566
LDLa 2938..2969 CDD:197566
LDLa 2989..3015 CDD:197566
LDLa 3030..3061 CDD:238060
EGF_CA 3062..>3091 CDD:214542
EGF_CA 3103..3141 CDD:214542
LY 3212..3254 CDD:214531
Ldl_recept_b 3275..3314 CDD:459654
LY 3299..3340 CDD:214531
LY 3354..3389 CDD:214531
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
YncE 3935..4148 CDD:442618
LY 4108..4150 CDD:214531
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
LOC100536757XP_021334054.3 None
Blue background indicates that the domain is not in the aligned region.

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