Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031762503.1 | Gene: | sorl1 / 100490681 | XenbaseID: | XB-GENE-995776 | Length: | 2199 | Species: | Xenopus tropicalis |
Alignment Length: | 1379 | Identity: | 400/1379 - (29%) |
---|---|---|---|
Similarity: | 579/1379 - (41%) | Gaps: | 342/1379 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 2997 IFKNQTCDGKPDCGDGSD----ETSSLCAHTRGCNGTDDFRCKNGACIHADLLCDRRNDCADFSD 3057
Fly 3058 EELCNVNECLIPDICEHECEDKVVGYQCHCRPGY--KVLPKSPHLCTDIDECDEQQPCSQTCINT 3120
Fly 3121 YGSYKCLCAKGYALVDHHTC------------KATSNVSME---LIFSNRYYIRQVDMTG--NGS 3168
Fly 3169 ILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLHQAMLKNP----DGLAVDW 3229
Fly 3230 VAKNLYWCDKGLDTIEVSQLDGKYRKVLINE-YLREPRGIALHPYQQHIFWSDWGDSPH-IGKAG 3292
Fly 3293 MDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLARSINPLLNLHH 3357
Fly 3358 IFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHPYRQQQPMSGNPCLAA 3422
Fly 3423 NCSTLCVLSPEEPYYKCMCPTNFILADDGRTCRANCTAAHFECVNTYKCIPFYWRCDTQDDCGDG 3487
Fly 3488 -SDEPETCPPFH--CEPGQYQCANKKCTHPSNLCDGINQCGDGSDELNCDKFTCFDNHM-KCGAT 3548
Fly 3549 ANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKKDQFQCGNNRCMPFVWVCDGDIDCPDKSDE 3613
Fly 3614 ANCDNVS--CGPNDFQCDSGRCIPLAWRCDDDHDCPNGEDEPASCFSSKATCDPTYFKCNNSKCI 3676
Fly 3677 PGRWRCDYENDCGDGSDELNCQMRNCSESEFRC-GTGKCIKHNYRCDGEIHCDDNSDE----INC 3736
Fly 3737 N------ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDEVNC-------TCHSDH-FSCGNG 3787
Fly 3788 KCIMSRWKCDGWDDCLDGSDESLETCAKT---------HCHANAFKCRNQLCVRNSALCDGINDC 3843
Fly 3844 GENEDESDAVCAA--------LP--KCRHDQFQCEN-DDCISKAFRCDGQYNCVDGSDEMNC--- 3894
Fly 3895 QPPVCGFGSCSQICIEKKAGHYNC-----------KCADGYHKGPEKNATCLASGPDQILLLASE 3948
Fly 3949 QEFRFILPAKQEGTTVVGFFQTDSLKID----VFDILIR--PKDTLLFW--IDSHHGK-VHTMKI 4004
Fly 4005 ATP------HVEGTGVRVRRDLKELTAFNIPE--LDDPKSLAV------------DWISQ----- 4044
Fly 4045 --RVYIIDSRHNQILATDIEGKKYISLVSTGMNPTDIVLEPESRIMIWSTLEN---GILVASL-- 4102
Fly 4103 ----DGSNKKSLVE---RDVGWPI-------------------SLSMDYPTGRLYWA-DYRKGTI 4140
Fly 4141 ETCRLNGKDRNVVRRFGNREKPQKIDV--------------FEDY-----------LYIKLYDQS 4180
Fly 4181 IIKMNKFGNDNGTY 4194 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | |||
LDLa | 2671..2702 | CDD:238060 | |||
LDLa | 2727..2759 | CDD:238060 | |||
LDLa | 2773..2802 | CDD:238060 | |||
LDLa | 2810..2844 | CDD:238060 | |||
LDLa | 2848..2878 | CDD:238060 | |||
LDLa | 2887..2916 | CDD:197566 | |||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | 6/21 (29%) | ||
LDLa | 3030..3061 | CDD:238060 | 7/30 (23%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 3/28 (11%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 9/49 (18%) | ||
LY | 3212..3254 | CDD:214531 | 15/45 (33%) | ||
LY | 3255..3297 | CDD:214531 | 18/43 (42%) | ||
LY | 3299..3340 | CDD:214531 | 13/40 (33%) | ||
LY | 3354..3389 | CDD:214531 | 17/34 (50%) | ||
LDLa | 3458..3490 | CDD:238060 | 8/32 (25%) | ||
LDLa | 3499..3533 | CDD:238060 | 16/33 (48%) | ||
LDLa | 3582..3616 | CDD:238060 | 19/33 (58%) | ||
LDLa | 3621..3652 | CDD:197566 | 14/30 (47%) | ||
LDLa | 3663..3697 | CDD:238060 | 16/33 (48%) | ||
LDLa | 3702..3736 | CDD:238060 | 12/38 (32%) | ||
LDLa | 3776..3808 | CDD:197566 | 17/32 (53%) | ||
LDLa | 3818..3849 | CDD:197566 | 12/30 (40%) | ||
LDLa | 3860..3894 | CDD:238060 | 14/34 (41%) | ||
NHL | 4029..>4158 | CDD:302697 | 31/181 (17%) | ||
NHL repeat | 4034..4074 | CDD:271320 | 10/58 (17%) | ||
NHL repeat | 4076..4115 | CDD:271320 | 8/50 (16%) | ||
LY | 4108..4150 | CDD:214531 | 11/64 (17%) | ||
NHL repeat | 4121..4158 | CDD:271320 | 7/37 (19%) | ||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
sorl1 | XP_031762503.1 | VPS10 | 115..744 | CDD:214740 | 36/165 (22%) |
LY | 777..812 | CDD:214531 | 19/36 (53%) | ||
LY | 815..854 | CDD:214531 | 12/38 (32%) | ||
Ldl_recept_b | 879..920 | CDD:395012 | 18/42 (43%) | ||
LY | 904..944 | CDD:214531 | 13/41 (32%) | ||
LY | 944..982 | CDD:214531 | 16/44 (36%) | ||
LDLa | 1069..1103 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1114..1144 | CDD:238060 | 10/33 (30%) | ||
Ldl_recept_a | 1148..1183 | CDD:395011 | 19/34 (56%) | ||
LDLa | 1189..1221 | CDD:197566 | 14/31 (45%) | ||
LDLa | 1231..1262 | CDD:238060 | 15/32 (47%) | ||
LDLa | 1272..1299 | CDD:197566 | 10/26 (38%) | ||
LDLa | 1316..1350 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1363..1394 | CDD:238060 | 17/32 (53%) | ||
LDLa | 1408..1442 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1460..1495 | CDD:238060 | 14/34 (41%) | ||
LDLa | 1509..1537 | CDD:238060 | 7/34 (21%) | ||
FN3 | 1546..1617 | CDD:214495 | 15/79 (19%) | ||
FN3 | 1639..1730 | CDD:238020 | 20/108 (19%) | ||
FN3 | 1922..2003 | CDD:214495 | |||
FN3 | 2013..2100 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |