Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031749368.1 | Gene: | lrp1b / 100485687 | XenbaseID: | XB-GENE-1019540 | Length: | 2321 | Species: | Xenopus tropicalis |
Alignment Length: | 2532 | Identity: | 870/2532 - (34%) |
---|---|---|---|
Similarity: | 1233/2532 - (48%) | Gaps: | 450/2532 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 2434 LREDDKPRGIAVEPCLGMIYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLY 2498
Fly 2499 WADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLFLR 2563
Fly 2564 EHVT-RPMGIVAVQNTSINCDANQCKILNGQCEDVCILNKSGQATCHCTQGVLAPDGRRCIAPVN 2627
Fly 2628 TSCGL-SQYNCHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQCPETHFMCQNHRCIPKEHKCD 2691
Fly 2692 GEQQCGDGSDETPLLCK---CQSEDIDMHPSNNNTKEMPDMFRCGSGECIPRKFLCDSLKDCRDF 2753
Fly 2754 SDEKMCAPIPCEK------NDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDP 2812
Fly 2813 GQFRCASGNCIAGSWHCDGEKDCPDGSDEINCRTECRHNQFACDKT-CIPASWQCDGKSDCEDGS 2876
Fly 2877 DEGPQ-CPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSGLGDEGSEDEGPQCGGVAHIPDCPP 2940
Fly 2941 PAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVPAFQPHSCPGGSLMHQCQDGLCIFKNQ-TCD 3004
Fly 3005 GKPDCGDGSDET--SSLCAHT-RGCNGTDDFRCKNGACIHADLLCDRRNDCADFSDEELCNVNEC 3066
Fly 3067 LIPDI--CEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCA 3129
Fly 3130 KGYALVDHHT--CKATSNVSMELIFSNRYYIRQVDMTG-NGSILINELSNAVALDYDWDSQCLYW 3191
Fly 3192 SDVTSTVGT-IKRYCPKENKTQTLHQAMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRK 3255
Fly 3256 VLINEYLREPRGIALHPYQQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQ 3320
Fly 3321 LFWGDAREDTISVSDLDGNHTRLLLARSINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFN 3385
Fly 3386 GQNCTTLITTIHRPMDLRVFHPYRQQQPMSGNPCLAAN--CSTLCVLSPEEPYYKCMCPTNFILA 3448
Fly 3449 DDGRTCRANCTAAHFECVNTYKCIPFYWRCDTQDDCGDGSDEPETCPPFHCEPGQYQCANKKCTH 3513
Fly 3514 PSNLCDGINQCGDGSDELNCDKFTCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACT 3578
Fly 3579 PLVCKKDQFQCGNNR-CMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAWRCDD 3642
Fly 3643 DHDCPNGEDEPA----------------SCFSSKATCDPTY-------------------FKCNN 3672
Fly 3673 SKCIPGRWRCDYENDCGDGSDELNCQ--MRNCSESEFRCGTGKCIKHNYRCDGEIHCDDNSDEIN 3735
Fly 3736 CNITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDEVNC----TCHSDHFSCGNGKCIMSRWKC 3796
Fly 3797 DGWDDCLDGSDESLETCAKTHC-HANAFKC-RNQLCVRNSALCDGINDCGENEDESDAVCAALPK 3859
Fly 3860 ---CRHDQFQCENDDCISKAFRCDGQYNCVDGSDEMNCQ-------------------------- 3895
Fly 3896 PPVC----GF------------------GSCSQICIEKKAGHYNCKCADGYHKGPEKNATCLASG 3938
Fly 3939 -PDQILLLASEQE-FRFILP----AKQEGTTVVGFFQTDSLKIDVFDILIRPKDTLLFW------ 3991
Fly 3992 ----IDSHHGKVHTMKIATPHVEGTGVRVRRDLKELTAFNI-PELDDPKSLAVDWISQRVYIIDS 4051
Fly 4052 RHNQI-----------------------------LATDIEGKKYISLVSTGMNPTDIVLEPESRI 4087
Fly 4088 MIWSTL--ENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDR 4150
Fly 4151 NVVRRFGNRE---KPQKIDVFEDYLYIKLYDQSIIKMNKFGNDNGTYL-LKGYRSSDIGILHPMK 4211
Fly 4212 QNRNISNPCAKDPCKSSRALCILSSESSVGYSCKCAEGYVMTDDGVCKAHADIPDYCPLQC-NLG 4275
Fly 4276 TCKIVDH-VPKCICQPQFEGELCEHYRCSGYCQNYGVCSVAPALPGSQEPPPLKCTCTAGWSGAR 4339
Fly 4340 CETSMPACQSRCHNGGSCLISETEGMKCSCPKMFTGEQCEHCRNLTCENGGICRETLTGTPQCEC 4404
Fly 4405 PDGFTGKRCEIDECADFCKNGGSCVISTKGQRQCKCPSGYFGEHCESNSCRDFCRNGGTC--SER 4467
Fly 4468 GGRLSCTCPPRYIGESCESDLCKTSSPPHFCDNTKVPTRDPCTLMICQNAGTCHI--IKGVALCN 4530
Fly 4531 CTDQWNGDLCTLPVTDDNPCARYCANGGVCHLDEYRLPHCSCIGEWQGNACEMPPHCVGGECNVC 4595
Fly 4596 RPGSSINECLCENNRVVPCLSDSADALKEEQEPTESGGVFSVVVLVLAVILLVFALFAGAVYFLK 4660
Fly 4661 KHR-----------------IAQP------FSHAR-----LTDNVEIMLTNAMYRGDADEA---- 4693
Fly 4694 ----PTFASEDDKG-------NFANPVYESMYADAIPEPVSTEITHS-----TAPDERKGLL 4739 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | 17/36 (47%) | ||
LY | 2475..2517 | CDD:214531 | 23/41 (56%) | ||
LDLa | 2630..2661 | CDD:238060 | 14/31 (45%) | ||
LDLa | 2671..2702 | CDD:238060 | 14/30 (47%) | ||
LDLa | 2727..2759 | CDD:238060 | 14/31 (45%) | ||
LDLa | 2773..2802 | CDD:238060 | 14/28 (50%) | ||
LDLa | 2810..2844 | CDD:238060 | 16/33 (48%) | ||
LDLa | 2848..2878 | CDD:238060 | 15/30 (50%) | ||
LDLa | 2887..2916 | CDD:197566 | 14/28 (50%) | ||
LDLa | 2938..2969 | CDD:197566 | 11/30 (37%) | ||
LDLa | 2989..3015 | CDD:197566 | 11/26 (42%) | ||
LDLa | 3030..3061 | CDD:238060 | 16/30 (53%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 14/30 (47%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 23/39 (59%) | ||
LY | 3212..3254 | CDD:214531 | 19/41 (46%) | ||
LY | 3255..3297 | CDD:214531 | 14/41 (34%) | ||
LY | 3299..3340 | CDD:214531 | 13/40 (33%) | ||
LY | 3354..3389 | CDD:214531 | 10/34 (29%) | ||
LDLa | 3458..3490 | CDD:238060 | 23/31 (74%) | ||
LDLa | 3499..3533 | CDD:238060 | 18/33 (55%) | ||
LDLa | 3582..3616 | CDD:238060 | 18/34 (53%) | ||
LDLa | 3621..3652 | CDD:197566 | 14/30 (47%) | ||
LDLa | 3663..3697 | CDD:238060 | 15/52 (29%) | ||
LDLa | 3702..3736 | CDD:238060 | 16/33 (48%) | ||
LDLa | 3776..3808 | CDD:197566 | 15/31 (48%) | ||
LDLa | 3818..3849 | CDD:197566 | 11/32 (34%) | ||
LDLa | 3860..3894 | CDD:238060 | 15/33 (45%) | ||
NHL | 4029..>4158 | CDD:302697 | 38/159 (24%) | ||
NHL repeat | 4034..4074 | CDD:271320 | 14/68 (21%) | ||
NHL repeat | 4076..4115 | CDD:271320 | 9/40 (23%) | ||
LY | 4108..4150 | CDD:214531 | 13/41 (32%) | ||
NHL repeat | 4121..4158 | CDD:271320 | 12/36 (33%) | ||
EGF_CA | <4386..4414 | CDD:238011 | 6/27 (22%) | ||
EGF_CA | 4415..4450 | CDD:238011 | 12/34 (35%) | ||
lrp1b | XP_031749368.1 | Ldl_recept_b | 17..58 | CDD:395012 | 21/40 (53%) |
LY | 42..84 | CDD:214531 | 23/41 (56%) | ||
LDLa | 201..230 | CDD:238060 | 14/28 (50%) | ||
LDLa | 246..273 | CDD:238060 | 16/28 (57%) | ||
LDLa | 278..312 | CDD:238060 | 16/49 (33%) | ||
LDLa | 327..361 | CDD:238060 | 15/33 (45%) | ||
LDLa | 369..403 | CDD:238060 | 16/33 (48%) | ||
LDLa | 407..438 | CDD:197566 | 15/30 (50%) | ||
LDLa | 447..480 | CDD:197566 | 15/32 (47%) | ||
LDLa | 531..564 | CDD:197566 | 13/34 (38%) | ||
LDLa | 578..612 | CDD:238060 | 18/34 (53%) | ||
cEGF | 635..658 | CDD:403760 | 10/23 (43%) | ||
EGF_CA | 655..685 | CDD:214542 | 22/29 (76%) | ||
Ldl_recept_b | 744..782 | CDD:423042 | 9/39 (23%) | ||
LY | 767..805 | CDD:214531 | 18/39 (46%) | ||
LY | 810..851 | CDD:214531 | 14/40 (35%) | ||
LY | 854..893 | CDD:214531 | 13/46 (28%) | ||
FXa_inhibition | 964..1000 | CDD:405372 | 18/36 (50%) | ||
LDLa | 1004..1035 | CDD:197566 | 23/31 (74%) | ||
LDLa | 1044..1078 | CDD:238060 | 18/33 (55%) | ||
LDLa | 1083..1118 | CDD:238060 | 12/38 (32%) | ||
LDLa | 1123..1158 | CDD:238060 | 18/34 (53%) | ||
LDLa | 1163..1197 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1202..1236 | CDD:238060 | 6/33 (18%) | ||
LDLa | 1240..1274 | CDD:238060 | 12/33 (36%) | ||
LDLa | 1281..1315 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1319..1354 | CDD:238060 | 19/34 (56%) | ||
LDLa | 1360..1391 | CDD:238060 | 15/30 (50%) | ||
LDLa | 1446..1480 | CDD:238060 | 15/33 (45%) | ||
EGF_CA | 1528..1562 | CDD:214542 | 11/37 (30%) | ||
NHL | 1625..1822 | CDD:302697 | 52/231 (23%) | ||
LY | <1655..>1674 | CDD:214531 | 9/20 (45%) | ||
Ldl_recept_b | 1723..1763 | CDD:423042 | 9/39 (23%) | ||
LY | 1747..1788 | CDD:214531 | 13/40 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1326at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |