DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlh1 and mutL

DIOPT Version :10

Sequence 1:NP_477022.1 Gene:Mlh1 / 35796 FlyBaseID:FBgn0011659 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_418591.1 Gene:mutL / 948691 ECOCYCID:EG11281 Length:615 Species:Escherichia coli


Alignment Length:661 Identity:178/661 - (26%)
Similarity:291/661 - (44%) Gaps:159/661 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTGIRRED 74
            |:.|...:.|:|||||:::|||:.:|||:||||||.:|.|.:.::.||.||::|:|||.||::::
E. coli     3 IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDE 67

  Fly    75 LAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGK-LQ 138
            ||:...|..|||:...:||..|.:.|||||||||||.|:.|::.::||:::..::| ||:|: :.
E. coli    68 LALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQA-YAEGRDMN 131

  Fly   139 GQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQGDAQ 203
            ...||.|...||.:.:.|||||.|.||:.||:...||..:.|::.|.|:....|...|...|...
E. coli   132 VTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIV 196

  Fly   204 PALR-TPVASSRSENIRIIYGAAISKELL--EFSHRDEVYK------FEAECLITQVNYSAKKCQ 259
            ...| .|....:...:..|.|.|..::.|  |:.|.|...:      ......:.::.|    | 
E. coli   197 RQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQY----C- 256

  Fly   260 MLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVH------- 317
               ::|.|::....:..::.......|.....|...:.|.:.|..:||||||.||||.       
E. coli   257 ---YVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLV 318

  Fly   318 --FLYQEEIVDSIKQQVEA------------RLLGSN---ATRTFYKQ--LRLPGAPDLDETQLA 363
              |:|| .::..::||:|.            |.:..|   |.|..:.:  .|.|.||.......:
E. coli   319 HDFIYQ-GVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPAS 382

  Fly   364 ---------------DKTQRIYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSSSQEASRLPEES 413
                           .|.|....:::::|.:..|||.   ||  :......:::||...|:    
E. coli   383 GSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLK---AP--EPQEPALAANSQSFGRV---- 438

  Fly   414 FRVT-----AAKKSREVRLSSV-LDMRKRVERQ----------CSVQLRSTLKNLVYVGCVDERR 462
              :|     .|...|:..:|.: |.:.:|..||          |:..|...|:..|   ..:|:.
E. coli   439 --LTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEAPVCAQPLLIPLRLKV---SAEEKS 498

  Fly   463 ALFQHETRLYMCNTRSFSEELFYQRMIYEFQ-NCSEITI-SPPLPLKE--LLIL----------- 512
            ||.:.::.|              ..:..:|| :...:|| :.||||::  |.||           
E. coli   499 ALEKAQSAL--------------AELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQ 549

  Fly   513 --------------SLESEAAGWTPEDGDKAELADGAADI------LLKKAPIMREYFGLRISED 557
                          :|.||.|.|:     .|:.....||:      |:|..|            .
E. coli   550 SVFEPGNIAQWIARNLMSEHAQWS-----MAQAITLLADVERLCPQLVKTPP------------G 597

  Fly   558 GMLESLPSLLH 568
            |:|:|:.  ||
E. coli   598 GLLQSVD--LH 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlh1NP_477022.1 mutl 8..317 CDD:273155 109/316 (34%)
Mlh1_C 426..664 CDD:465109 40/189 (21%)
mutLNP_418591.1 mutL 1..613 CDD:234630 178/661 (27%)

Return to query results.
Submit another query.