DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gasz and AT4G03500

DIOPT Version :9

Sequence 1:NP_610362.1 Gene:Gasz / 35795 FlyBaseID:FBgn0033273 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_192259.1 Gene:AT4G03500 / 827731 AraportID:AT4G03500 Length:652 Species:Arabidopsis thaliana


Alignment Length:308 Identity:65/308 - (21%)
Similarity:110/308 - (35%) Gaps:64/308 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SDSSYDGFYFSDKVKRSKPAPYVDPEQKLYDAVVAGDLKTMQEEMRKLVLQVDQPVKGGLNLLML 80
            |..|.|.....|:...:||   :||  |...||.||....::.....:.:........|..:|.|
plant    49 STPSLDLSTLFDETSETKP---MDP--KTMAAVRAGKENYLRSNNSYISVAPTLVNDRGNTILHL 108

  Fly    81 ACREGHYKIVEWLLERA-GANVNRQLDSLMPLMMACNTTHKD------------PC----LAERI 128
            |...||..:|.:::::. |..:...:...:.|.:|....|.|            .|    :|:||
plant   109 AASSGHVSLVRYIIQKCPGLLLKSNMMGEVALHLAAEAGHLDVVWNLIDFINDISCTNLPVAKRI 173

  Fly   129 -------------VGLLLRHGAVIN-----------VSEKYGMTPFMFACQNGFAGVVRLLIKDA 169
                         |.|..:|..|.:           |:.:.|.:|...|.:.|...:|..:....
plant   174 YFAKNKNQDTALHVALKGKHEVVASYLVSAAKSLSFVANRDGFSPLYLAIEAGHTSLVTTMCHGT 238

  Fly   170 SFDAVDNQGCTAIFH-AIEKNHVEVVKLLVEAGANATIANNKGYTPTQVAECHGYYDLLEIL--P 231
            : :.....|..:|.| |::.|..:::..|:...|:.....::|.|........|||.....|  .
plant   239 N-ELSSKVGGRSIVHAALKANRKDILDALLSKDASLINLRDEGRTSLSFGASIGYYQGFSYLFDK 302

  Fly   232 RPASTY------LVPTHF---LGYNTLRDHIPRIFLKSDCPEYFQELN 270
            .....|      |.|||.   .|:..:.:.|    || .|||..:.|:
plant   303 NRDKVYVSDDDGLFPTHMAAKYGHVQILEEI----LK-HCPEAIELLD 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaszNP_610362.1 Ank_2 44..141 CDD:289560 24/137 (18%)
ANK repeat 73..106 CDD:293786 8/33 (24%)
ANK 74..198 CDD:238125 31/165 (19%)
ANK repeat 110..143 CDD:293786 13/72 (18%)
Ank_2 111..208 CDD:289560 25/137 (18%)
ANK repeat 145..175 CDD:293786 5/29 (17%)
ANK repeat 177..208 CDD:293786 7/31 (23%)
SAM 273..324 CDD:197735
SAM_superfamily 273..321 CDD:188886
PHA03233 <289..>366 CDD:223016
AT4G03500NP_192259.1 Ank_2 73..166 CDD:289560 17/92 (18%)
ANK 98..231 CDD:238125 25/132 (19%)
ANK repeat 101..132 CDD:293786 8/30 (27%)
ANK repeat 135..178 CDD:293786 8/42 (19%)
Ank_2 185..278 CDD:289560 17/93 (18%)
ANK 212..368 CDD:238125 31/140 (22%)
ANK repeat 214..244 CDD:293786 5/30 (17%)
ANK repeat 246..278 CDD:293786 7/31 (23%)
ANK 311..437 CDD:238125 12/40 (30%)
ANK repeat 313..345 CDD:293786 11/36 (31%)
Ank_2 319..418 CDD:289560 9/32 (28%)
ANK repeat 347..384 CDD:293786
ANK repeat 386..418 CDD:293786
PGG 473..581 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.