DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Gasz and AT4G03490

DIOPT Version :9

Sequence 1:	NP_610362.1	Gene:	Gasz / 35795	FlyBaseID:	FBgn0033273	Length:	461	Species:	Drosophila melanogaster
Sequence 2:	NP_001328102.1	Gene:	AT4G03490 / 827426	AraportID:	AT4G03490	Length:	710	Species:	Arabidopsis thaliana

Alignment Length:	463	Identity:	100/463 - (21%)
Similarity:	173/463 - (37%)	Gaps:	132/463 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    38 VDPEQKLYDAVVAGDLKTMQEEMRKLVLQV-DQPVKGGLNLLMLACREGHYKIVEWLLE------ 95
            :|||  .|.|||.|.::..::.|.:..:.| ||....|..:|.||...||..:|..:|.
plant     1 MDPE--TYRAVVMGKVQEFEKVMEENEIPVLDQVTFQGNTILHLAAIYGHDHLVRRILAYELNIL 63

  Fly    96 ---RAGANVN--------------RQLDSLMPLMMACNTTHKDPCLAERIVGLLLRHGAVINVSE 143
               :.|.|.|              |.....:.|.:|....||      .|||||:  ..:..:.:
plant    64 RNWKRGLNCNFVPSFSHYQTLLVRRNYKGDLALHVAAAAGHK------LIVGLLI--DCLRQLPQ 120

  Fly   144 KYGMTPFMFACQNGFAGVVRLLIKDASFDAVDNQGCTAIFHAIEKNHVEV-VKLLVEAGANATIA 207
            ...|.          .|..:::|.:. |...:|.|.||:..:::.|||.| ::|:.|..:...:.
plant   121 DITMV----------IGSEQMVIGNI-FRVSNNDGNTALHLSLKGNHVSVSLQLVREDRSTCFLL 174

  Fly   208 NNKGYTPTQVAECHGYYDLLEILPRPASTYLVPTHFLGYNTLRDHIPRIFLKSDCPEYFQELNGI 272
            :.:..:|..:|...||..|:|.:.|.     :...|:|.:.|...:     ||   :....|..:
plant   175 DKEDVSPLYMAAEAGYVSLVEHMLRG-----LDASFVGKSVLCAAV-----KS---QNLDILTAV 226

  Fly   273 LEAINIGNMVQYFAIARISLADFLVMDEQSLR-----------EIGIEYPIFRHKILTGILDFHL 326
            ||                |.:|.:...::..|           :||:::.:.|..
plant   227 LE----------------SDSDLVESRDEDGRTPLATAASIGYDIGVQHMLTRFA---------- 265

  Fly   327 HHWSNSSIARVKKDEMNNFYEILLITASHLQHLVIIQASLRFILKNQEH-----NKMGQPSEMQV 386
               |::.:|.:|.:: .:|       ..|........::|:.|||:...     |..|| :.:.|
plant   266 ---SSTQVAYIKNED-GSF-------PIHSACSARCTSALKVILKHHPDTIEMLNSQGQ-NVLHV 318

  Fly   387 AAMKSNLQ--GY----RDVLNQITK------TVKYLGSFS--PSQNPLFIDFNEILAERKRKKVR 437
            ||...|.:  ||    .||...|.:      |..:|.|.:  |....|||.     ..|...|:.
plant   319 AAKSGNARAVGYLLRKSDVKRLINEQDIEGNTPLHLASSNSHPKVVSLFIH-----DRRVDLKIL 378

  Fly   438 SYFKYTTI 445
            :|..:|.:
plant   379 NYKGFTAL 386

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Gasz	NP_610362.1	Ank_2	44..141	CDD:289560	30/120 (25%)
		ANK repeat	73..106	CDD:293786	12/55 (22%)
		ANK	74..198	CDD:238125	34/147 (23%)
		ANK repeat	110..143	CDD:293786	9/32 (28%)
		Ank_2	111..208	CDD:289560	23/97 (24%)
		ANK repeat	145..175	CDD:293786	4/29 (14%)
		ANK repeat	177..208	CDD:293786	9/31 (29%)
		SAM	273..324	CDD:197735	8/61 (13%)
		SAM_superfamily	273..321	CDD:188886	8/58 (14%)
		PHA03233	<289..>366	CDD:223016	11/87 (13%)
AT4G03490	NP_001328102.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X100
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000