DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gasz and ACD6

DIOPT Version :9

Sequence 1:NP_610362.1 Gene:Gasz / 35795 FlyBaseID:FBgn0033273 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_567430.1 Gene:ACD6 / 827085 AraportID:AT4G14400 Length:670 Species:Arabidopsis thaliana


Alignment Length:437 Identity:96/437 - (21%)
Similarity:181/437 - (41%) Gaps:98/437 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PAPYVDPEQKLYDAVVAGDLKTMQEEMRKLVLQVDQPVKG--GLNLLMLACREGHYKIVEWLLER 96
            |...|:...:::..:..|: |...|::|.....::: ||.  |.::|.:|.:.||.::|:.::..
plant    61 PGEDVEMTPEIFGGMSNGE-KECLEKLRSNGTPMER-VKSNTGDSILHIAAKWGHLELVKEIIFE 123

  Fly    97 AGA-----NVNRQLDSLMPLMMACNTTHKDPCLAERIVGLLLRHGAVINVSEKYGMTPFMFACQN 156
            ...     |.:||    .||.:|.:..|..  :.|.:|..:....|.::..|..|:.|.:..   
plant   124 CPCLLFEQNSSRQ----TPLHVATHGGHTK--VVEALVASVTSALASLSTEESEGLNPHVLK--- 179

  Fly   157 GFAGVVRLLIKDASFDAVDNQGCTAIFHAIEKNHVEVVKLLVEAGANAT-IANNKGYTPTQVAEC 220
                              |..|.||:::|||..::|:...||.|..:|. :.||||.:....|..
plant   180 ------------------DEDGNTALYYAIEGRYLEMATCLVNADKDAPFLGNNKGISSLYEAVD 226

  Fly   221 HG--YYDLLEILPRPASTYLVPTHFLGYNTLRDHIPRIFLKSDCPEYFQELNGILEAINIGNMVQ 283
            .|  :.||::.:               ..|..|::.|...|.:..   .:|.|.....::....:
plant   227 AGNKFEDLVKAI---------------LKTTDDNVDREVRKFNLD---SKLQGNKHLAHVALKAK 273

  Fly   284 YFAIARISLADF-LVMDEQSLREIG---IEY--PIFRHKILTGILDFHLHHWSNSSIARVKKDEM 342
            ...:..:.|.:: .:||||.  |.|   :.|  .|..:|.|..||        |.|...|...:.
plant   274 SIGVLDVILDEYPSLMDEQD--EDGRTCLSYGASIGYYKGLCNIL--------NRSTKGVYVCDQ 328

  Fly   343 NNFYEILLITASHLQHLVIIQASL------RFILKNQEHNKMGQPSEMQVAAM-KSNLQGYRDVL 400
            :..:.|  .:|:..:|..||:..:      :::|     |::|| :.:.|||. :::|..|..:.
plant   329 DGSFPI--HSAAKNEHYEIIKEFIKRCPASKYLL-----NRLGQ-NILHVAAKNEASLTAYMLMH 385

  Fly   401 NQITKTVKYLGSFSPSQNPLFI-----DFNEI--LAERKRK--KVRS 438
            ::.||.:. :|.......||.:     ||:.|  ||.|..:  |:|:
plant   386 DKDTKHLG-VGQDVDGNTPLHLAVMNWDFDSITCLASRNHEILKLRN 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaszNP_610362.1 Ank_2 44..141 CDD:289560 22/103 (21%)
ANK repeat 73..106 CDD:293786 9/39 (23%)
ANK 74..198 CDD:238125 27/128 (21%)
ANK repeat 110..143 CDD:293786 7/32 (22%)
Ank_2 111..208 CDD:289560 21/97 (22%)
ANK repeat 145..175 CDD:293786 2/29 (7%)
ANK repeat 177..208 CDD:293786 11/31 (35%)
SAM 273..324 CDD:197735 13/56 (23%)
SAM_superfamily 273..321 CDD:188886 11/53 (21%)
PHA03233 <289..>366 CDD:223016 21/82 (26%)
ACD6NP_567430.1 ANK 97..239 CDD:238125 40/183 (22%)
ANK repeat 101..132 CDD:293786 6/30 (20%)
Ank_2 105..208 CDD:289560 29/129 (22%)
ANK repeat 134..180 CDD:293786 12/72 (17%)
ANK repeat 182..209 CDD:293786 10/26 (38%)
Ank_2 267..352 CDD:289560 21/96 (22%)
ANK 290..419 CDD:238125 36/147 (24%)
ANK repeat 329..361 CDD:293786 6/38 (16%)
Ank_2 334..426 CDD:289560 25/100 (25%)
ANK repeat 363..397 CDD:293786 10/35 (29%)
PGG 506..594 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.