DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gasz and Tanc2

DIOPT Version :9

Sequence 1:NP_610362.1 Gene:Gasz / 35795 FlyBaseID:FBgn0033273 Length:461 Species:Drosophila melanogaster
Sequence 2:XP_038942075.1 Gene:Tanc2 / 303599 RGDID:1309285 Length:2077 Species:Rattus norvegicus


Alignment Length:294 Identity:85/294 - (28%)
Similarity:122/294 - (41%) Gaps:72/294 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMSNLCKYGPPPDSDSDSSYD--GF-----YFSDKVKRSKPAPYVDPEQK-----LYDAVVAGDL 53
            |::.|.::|...|:.|:|...  |:     :.|..|...|....||...|     |..|.:.|.|
  Rat   974 MVALLLEFGANVDASSESGLTPLGYAAAAGFLSIVVLLCKKRAKVDHLDKNGQCALVHAALRGHL 1038

  Fly    54 KTMQEEMRKLVLQVDQPVKG---GL--------NLLMLACREGHYKIVEWLL----------ERA 97
                 |:.|.::|.|..:.|   |:        ..|:.|...|:.:||.:||          |||
  Rat  1039 -----EVVKFLIQCDWTMAGQQQGVFKKSQAIQQALIAAASMGYTEIVSYLLDLPEKDEEEVERA 1098

  Fly    98 GANVNRQLDSL---MPLMMACNTTHKDPC--LAE-------------------------RIVGLL 132
            ..|   ..|||   ..|..|......|.|  |.|                         :||.||
  Rat  1099 QIN---SFDSLWGETALTAAAGRGKLDVCRLLLEQGAAVAQPNRRGAVPLFSTVRQGHWQIVDLL 1160

  Fly   133 LRHGAVINVSEKYGMTPFMFACQNGFAGVVR-LLIKDASFDAVDNQGCTAIFHAIEKNHVEVVKL 196
            |.|||.:|:::|.|.||.|.|...|..|.|. ||.:.||...:|.:|.||:..|..|.|:.||:.
  Rat  1161 LTHGADVNMADKQGRTPLMMAASEGHLGTVDFLLAQGASIALMDKEGLTALSWACLKGHLSVVRS 1225

  Fly   197 LVEAGANATIANNKGYTPTQVAECHGYYDLLEIL 230
            ||:.||....|:..|.||..:|..:|..::::.|
  Rat  1226 LVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFL 1259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaszNP_610362.1 Ank_2 44..141 CDD:289560 38/147 (26%)
ANK repeat 73..106 CDD:293786 13/53 (25%)
ANK 74..198 CDD:238125 52/172 (30%)
ANK repeat 110..143 CDD:293786 15/59 (25%)
Ank_2 111..208 CDD:289560 41/124 (33%)
ANK repeat 145..175 CDD:293786 12/30 (40%)
ANK repeat 177..208 CDD:293786 12/30 (40%)
SAM 273..324 CDD:197735
SAM_superfamily 273..321 CDD:188886
PHA03233 <289..>366 CDD:223016
Tanc2XP_038942075.1 PHA03095 930..>1224 CDD:222980 73/257 (28%)
ANK repeat 963..989 CDD:293786 4/14 (29%)
ANK repeat 991..1022 CDD:293786 7/30 (23%)
ANK repeat 1108..1138 CDD:293786 6/29 (21%)
ANK repeat 1140..1171 CDD:293786 9/30 (30%)
ANKYR <1170..1296 CDD:223738 33/90 (37%)
ANK repeat 1174..1204 CDD:293786 12/29 (41%)
ANK repeat 1206..1237 CDD:293786 12/30 (40%)
ANK repeat 1239..1270 CDD:293786 6/21 (29%)
ANK repeat 1272..1302 CDD:293786
TPR <1324..1442 CDD:223533
TPR repeat 1331..1356 CDD:276809
TPR repeat 1361..1404 CDD:276809
TPR repeat 1409..1438 CDD:276809
PHA03247 <1513..1708 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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