Protein Alignment RagC-D and rragca

DIOPT Version :10

• Sequence 1: NP_610361.1
• Gene: RagC-D / 35793
• FlyBaseID: FBgn0033272
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001018471.1
• Gene: rragca / 573492
• ZFINID: ZDB-GENE-050522-355
• Length: 380
• Species: Danio rerio
• Alignment Length: 344
• Identity: 253/344 - (73%)
• Similarity: 295/344 - (85%)
• Gaps: 9/344 - (2%)

  Fly     6 DDY-PADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRRSGKSSIQKVVFHKMSPNET 69
            |.| .||:|||||||.....| :|..|:   .|::||||||||:|||||||||||||||||||||
Zfish    11 DSYGVADSFPKDFGYGEEEGD-IEDSPS---PSDSKPRILLMGLRRSGKSSIQKVVFHKMSPNET 71

  Fly    70 LFLESTSKIVKDDINNSSFVQFQIWDFPGQIDFFEPTFDSDMIFGGCGALVFVIDAKDDYNEALT 134
            ||||||:||.||||::||||.|||||||||:|||:||||.::||.|.|||:|||||:|||.|||:
Zfish    72 LFLESTNKIYKDDISSSSFVNFQIWDFPGQVDFFDPTFDYELIFRGTGALIFVIDAQDDYVEALS 136

  Fly   135 KFKNTVLQAYKVNKRIKFEVFIHKVDGISDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTSI 199
            :...||.:||:||..|.||||||||||:|||.|:|:|||||||::|||.:|.|:::||||:||||
Zfish   137 RLHLTVSRAYRVNPEINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADASLEKLHLSFYLTSI 201

  Fly   200 YDHSIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFLFDVVSKIYIATDSSPVDMQTYELC 264
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||:||||
Zfish   202 YDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELC 266

  Fly   265 CDMIDVVIDLSSIYSSEE----TAFDSGSSSLIKLNNNTILYLREVNKFLALVCILREENFNRQG 325
            |||||||||:|.||..:|    :|:|..|.::|||||.|:|||:||.||||||||||.|:|.|:|
Zfish   267 CDMIDVVIDVSCIYGLKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILRGESFERKG 331

  Fly   326 VIDYNFICFRDAISEVFEL 344
            :|||||.|||.||.||||:
Zfish   332 LIDYNFHCFRKAIHEVFEV 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RagC-D	NP_610361.1	RagC_like	42..216	CDD:206745	133/173 (77%)
rragca	NP_001018471.1	RagC_like	44..218	CDD:206745	133/173 (77%)