Protein Alignment RagC-D and ragc-1

DIOPT Version :9

• Sequence 1: NP_610361.1
• Gene: RagC-D / 35793
• FlyBaseID: FBgn0033272
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_502187.1
• Gene: ragc-1 / 178084
• WormBaseID: WBGene00012497
• Length: 338
• Species: Caenorhabditis elegans
• Alignment Length: 344
• Identity: 157/344 - (45%)
• Similarity: 235/344 - (68%)
• Gaps: 31/344 - (9%)

  Fly     4 DDDDYPADTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRRSGKSSIQKVVFHKMSPNE 68
            ::||||                            :::|.::|||.:||||:||:||||.||||||
 Worm    18 EEDDYP----------------------------DSRPTVILMGHKRSGKTSIRKVVFQKMSPNE 54

  Fly    69 TLFLESTSKIVKDDINNSSFVQFQIWDFPGQIDFFEPTFDSDMIFGGCGALVFVIDAKDDYNEAL 133
            |:|:|||::|.:|.| .|||:.|:..:||||:..|:.:.|...:|..|.||:|:|||:.:..|.:
 Worm    55 TMFVESTARITRDTI-CSSFINFETIEFPGQMCPFDDSLDPVGVFQKCEALLFIIDAQAELQEPI 118

  Fly   134 TKFKNTVLQAYKVNKRIKFEVFIHKVDGISDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTS 198
            ........:|||:|:.||||||:||.||:::::::|::.:|:.:..:.:.:.....:.:::||||
 Worm   119 ATLVEYFCRAYKINQNIKFEVFVHKADGLTEEARVETKFNIYHQVKETIKDQIDVDLQVTYHLTS 183

  Fly   199 IYDHSIFEAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFLFDVVSKIYIATDSSPVDMQTYEL 263
            |||||||||||||||.|:.||||||.||::|..:|.:.|:||||::|||||||||.||:|..|||
 Worm   184 IYDHSIFEAFSKVVQNLVKQLPTLERLLDVFNNSSKVTKSFLFDILSKIYIATDSEPVEMSIYEL 248

  Fly   264 CCDMIDVVIDLSSIYSSEETA--FDSGSSSLIKLNNNTILYLREVNKFLALVCILREENFNRQGV 326
            |||||||.:||||||...|..  :|..|||:|:|.:..:::||:|||.||||.|::|:...:.|.
 Worm   249 CCDMIDVTLDLSSIYGVAENGSNYDERSSSVIRLKSEQVMFLRQVNKHLALVFIMKEDGNEKAGF 313

  Fly   327 IDYNFICFRDAISEVFELR 345
            ||:||..|:..|.:||:::
 Worm   314 IDHNFGVFKAGIEQVFKVK 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RagC-D	NP_610361.1	RagC_like	42..216	CDD:206745	81/173 (47%)
ragc-1	NP_502187.1	RagC_like	28..201	CDD:206745	81/173 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160162202
Domainoid	1	1.000	244	1.000	Domainoid score	I1220
eggNOG	1	0.900	-	-		E1_KOG3887
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H39141
Inparanoid	1	1.050	314	1.000	Inparanoid score	I1537
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53655
OrthoDB	1	1.010	-	-		D1216811at2759
OrthoFinder	1	1.000	-	-		FOG0002298
OrthoInspector	1	1.000	-	-		oto18345
orthoMCL	1	0.900	-	-		OOG6_102660
Panther	1	1.100	-	-	LDO	PTHR11259
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R533
SonicParanoid	1	1.000	-	-		X1521
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	17	16.800