Protein Alignment RagC-D and rragcb

DIOPT Version :9

• Sequence 1: NP_610361.1
• Gene: RagC-D / 35793
• FlyBaseID: FBgn0033272
• Length: 385
• Species: Drosophila melanogaster
• Sequence 2: NP_001093538.1
• Gene: rragcb / 100000325
• ZFINID: ZDB-GENE-070705-380
• Length: 392
• Species: Danio rerio
• Alignment Length: 344
• Identity: 249/344 - (72%)
• Similarity: 291/344 - (84%)
• Gaps: 4/344 - (1%)

  Fly    11 DTFPKDFGYRAYNQDGLELEPNATGSSETKPRILLMGMRRSGKSSIQKVVFHKMSPNETLFLEST 75
            |:|||||||...|.|.::.....:.|::.||||||||:|||||||||||||||||||||||||||
Zfish    15 DSFPKDFGYGVENMDMMQENLENSPSADNKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST 79

  Fly    76 SKIVKDDINNSSFVQFQIWDFPGQIDFFEPTFDSDMIFGGCGALVFVIDAKDDYNEALTKFKNTV 140
            :||.||||:.||||.|.|||||||:|||:||||.:|||.|.|||:|||||:|||.|||.:...||
Zfish    80 NKIYKDDISGSSFVNFHIWDFPGQVDFFDPTFDYEMIFRGTGALIFVIDAQDDYVEALGRLHLTV 144

  Fly   141 LQAYKVNKRIKFEVFIHKVDGISDDSKMESQRDIHQRSSDDLNEAGLDQIHLSFHLTSIYDHSIF 205
            .:|::||..|.||||||||||:|||.|:|:|||||||::|||.:|.|:::||||:||||||||||
Zfish   145 SRAFRVNPEINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADASLEKLHLSFYLTSIYDHSIF 209

  Fly   206 EAFSKVVQKLIPQLPTLENLLNIFIPNSGIEKAFLFDVVSKIYIATDSSPVDMQTYELCCDMIDV 270
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||:||||||||||
Zfish   210 EAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDV 274

  Fly   271 VIDLSSIYSSEE----TAFDSGSSSLIKLNNNTILYLREVNKFLALVCILREENFNRQGVIDYNF 331
            |||:|.||..::    .|:|..|.::|||||.|:|||:||.||||||||||||:|.|:|:|||||
Zfish   275 VIDVSCIYGLKDEGNGNAYDKESLAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNF 339

  Fly   332 ICFRDAISEVFELRLKRQK 350
            .|||.||.||||:....|:
Zfish   340 HCFRKAIHEVFEVSGSTQR 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RagC-D	NP_610361.1	RagC_like	42..216	CDD:206745	132/173 (76%)
rragcb	NP_001093538.1	Gem1	46..220	CDD:224025	132/173 (76%)
		RagC_like	46..220	CDD:206745	132/173 (76%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170586401
Domainoid	1	1.000	382	1.000	Domainoid score	I790
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	501	1.000	Inparanoid score	I1330
OMA	1	1.010	-	-		QHG53655
OrthoDB	1	1.010	-	-		D1216811at2759
OrthoFinder	1	1.000	-	-		FOG0002298
OrthoInspector	1	1.000	-	-		otm26371
orthoMCL	1	0.900	-	-		OOG6_102660
Panther	1	1.100	-	-	O	PTHR11259
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1521
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	13	12.910