DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8708 and AT5G12460

DIOPT Version :9

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_568279.2 Gene:AT5G12460 / 831121 AraportID:AT5G12460 Length:441 Species:Arabidopsis thaliana


Alignment Length:469 Identity:91/469 - (19%)
Similarity:148/469 - (31%) Gaps:160/469 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SLYPYLSRRFSDSQVATGGQLAPEQSGLKHDHRNDNVSVAEQLKKE----VRILCWVMTNPTNHK 108
            :|:..|...||.|..::                :.:||::.|:.:|    :..|.:|:...|...
plant     4 NLFAPLDLSFSSSSSSS----------------SSSVSLSLQITREPPTNISHLFFVIVGSTKTW 52

  Fly   109 KKARHVKRTWGK----RCNILLFMSSGAD-----EELPTVKLDVGEGREN-------LWAKVKEA 157
            :..|.....|.:    :..:.|....|.|     ::.|...::......|       |:..::|:
plant    53 RYRRGYIEPWWRPNITKGYVFLERPPGPDLLPWPQQSPPFSVNKESFITNKFKTQIRLFYSLQES 117

  Fly   158 FKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYNPETPVHFG-----------FKFKPFVKQ 211
            ||..    ..:..:|...||||...::|:...|..||.:...:.|           |.|    ..
plant   118 FKKA----SKETRWFVIGDDDTLFFLDNLVKALDRYNHKKHYYVGMNSENVWSNAIFAF----DM 174

  Fly   212 GYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTV-VNEDIEIGRCMENLNVTA----------- 264
            ||  ||.||.||...    ||..:.|.:.|:...: |..|:...||:.:|.:..           
plant   175 GY--GGGGYALSYPT----VVTLLSNMEECIKRYLGVYSDLLSFRCLADLGIDLTLEKGMHQNDL 233

  Fly   265 -GDSRDEIGRGRMFPFIPEHH------LIP--------------AKADKNFWYWNYLYYKTDDGL 308
             ||....:......|.|..||      :.|              ||.|::......:.|:.....
plant   234 HGDISGLLSAHPQSPLISLHHFDVIDPIFPGMNRQQSVNHLMETAKTDQSRVLQQTICYQRGYNW 298

  Fly   309 DCCSDLAISFHYVAPNSFYVLDYLIYHLKPYGLLRSLEP--------LPA--------------- 350
            ........|.|      .|...|...|||     |.||.        :||               
plant   299 SVSVSWGYSVH------IYQSIYPRSHLK-----RPLETFRPWKDVRIPAYGFNTRRVTNDPCEM 352

  Fly   351 ----------------------KLKVGQFLPPPVEARGRLASNEDSAD-DYDRIYTTTTEKPKEP 392
                                  |:|:.:.|||.:     |..|..|.: ...|:..||..|..|.
plant   353 PRQFFFDSVVEDKNQSLVTTIYKMKMERRLPPCL-----LNGNHSSRNITQVRVIATTMHKMVEG 412

  Fly   393 ----DAREMDSKEV 402
                |.:.::|.|:
plant   413 IECCDVQNVNSTEI 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8708NP_610360.2 MIP-T3 <385..>449 CDD:287245 6/22 (27%)
AT5G12460NP_568279.2 Galactosyl_T <126..>184 CDD:304462 18/63 (29%)
Galactosyl_T 167..416 CDD:304462 55/274 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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