DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8708 and C1galt1c1

DIOPT Version :10

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_067525.1 Gene:C1galt1c1 / 59048 MGIID:1913493 Length:316 Species:Mus musculus


Alignment Length:299 Identity:76/299 - (25%)
Similarity:135/299 - (45%) Gaps:72/299 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 HDHRN---------DNVSVAE--QLKKEVRILCWVMTNPTNHKKKARHVKRTWGKRCNILLFMSS 130
            |:|.:         ..:|.||  :|.|..|:.|.|:..|.:....|. ||.||.|.|:...|.||
Mouse    37 HEHHHLQAPNKDDISKISEAERMELSKSFRVYCIVLVKPKDVSLWAA-VKETWTKHCDKAEFFSS 100

  Fly   131 GADEELPTVKLDVGEGRENLWAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYNP 195
            ...:...::.:|..:    :|..:::|:||.|..:.:..::|:.|...|:|||||::|.|...:.
Mouse   101 ENVKVFESINMDTND----MWLMMRKAYKYAYDQYRDQYNWFFLARPTTFAVIENLKYFLLKKDQ 161

  Fly   196 ETPVHFGFKFKPFVKQG---YMSGGAGYILSREALRRFVVEGIPNPKMCLP-------GTV--VN 248
            ..|.:.|..    ||.|   |:|...|.:||.|:::|.      |..:.:|       |.:  ::
Mouse   162 SQPFYLGHT----VKSGDLEYVSVDGGIVLSIESMKRL------NSLLSVPEKCPEQGGMIWKIS 216

  Fly   249 EDIEIGRCMENLNVTAGDSRDEIGRGRMFP------FIPE------HHLIPAKADKNFWYWNYLY 301
            ||.::..|::...|.|.::.|..|:. :|.      ||.|      :.::..             
Mouse   217 EDKQLAVCLKYAGVFAENAEDADGKD-VFNTKSVGLFIKEAMTNQPNQVVEG------------- 267

  Fly   302 YKTDDGLDCCSDLAISFHYVAPNSFYVLDYLIYHLKPYG 340
                    ||||:|::|:.:.||..:|:.|.:|.|:.:|
Mouse   268 --------CCSDMAVTFNGLTPNQMHVMMYGVYRLRAFG 298

Return to query results.
Submit another query.