DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8708 and c1galt1b

DIOPT Version :9

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_956345.1 Gene:c1galt1b / 337131 ZFINID:ZDB-GENE-030131-9075 Length:374 Species:Danio rerio


Alignment Length:407 Identity:170/407 - (41%)
Similarity:230/407 - (56%) Gaps:62/407 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RSVFTLIAGLVVGYCLAQIFSSIAPHESLYPYLSRR-FS-DSQVATGG-------QLAPEQS--- 73
            ||.|  ..|.:||.|            |||..|.:. |: ||.....|       ::..|::   
Zfish     7 RSAF--YVGFLVGTC------------SLYLLLRQAGFTRDSGSREPGTHDKTLLEMLEEENKNW 57

  Fly    74 --------GLKHDHR-NDNVSVAEQLKKEVRILCWVMTNPTNHKKKARHVKRTWGKRCNILLFMS 129
                    .|.|.|. .::.::|:.|.|.|||||||||.|.|.:|||||||.||.:.|||::|:|
Zfish    58 KKERSALFNLNHPHHTGEDGALADSLYKRVRILCWVMTGPDNLEKKARHVKATWSRHCNIVVFIS 122

  Fly   130 SGADEELPTVKLDVGEGRENLWAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYN 194
            |..:.:.|||.|:..|||:.|:.|...||.||...|.::||:|.|||||||.:::|:|::|..::
Zfish   123 SVDNPDFPTVGLNTKEGRDQLYWKTIRAFHYVMEKHSDEADWFLKADDDTYVIVDNLRWILARHS 187

  Fly   195 PETPVHFGFKFKPFVKQGYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTVVNEDIEIGRCMEN 259
            ||.||:||.:|||:||||||||||||:||:|||||| |||. ..|:|...|.| ||:.:|:|||.
Zfish   188 PEDPVYFGRRFKPYVKQGYMSGGAGYVLSKEALRRF-VEGF-RTKVCTHTTSV-EDLAMGQCMEK 249

  Fly   260 LNVTAGDSRDEIGRGRMFPFIPEHHLIPAKADKNFWYWNYLYYKTDDGLDCCSDLAISFHYVAPN 324
            :.|.||||||.:.|....||:||.|| .....|.||||||.||....|..||||||:|||||..:
Zfish   250 IGVKAGDSRDTMQRETFHPFVPESHL-TGTFPKTFWYWNYCYYPIVQGPQCCSDLAVSFHYVDAS 313

  Fly   325 SFYVLDYLIYHLKPYGLLRSLEPLPAKLKVGQFLPPPVEARGRLASNEDSADDYDRIYTTTTEKP 389
            ..|:|:|..|||:.:|.....:|....:|.    |..||.|                   ..|:.
Zfish   314 HMYLLEYYTYHLRAFGYKYRYQPPEPNVKA----PEKVETR-------------------VLEQK 355

  Fly   390 KEPDAREMDSKEVEKED 406
            .:.:|:|.:::..|..|
Zfish   356 DKVEAQEEENQSPELND 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8708NP_610360.2 MIP-T3 <385..>449 CDD:287245 5/22 (23%)
c1galt1bNP_956345.1 Galactosyl_T 107..274 CDD:304462 91/169 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..374 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I3636
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135611
Inparanoid 1 1.050 314 1.000 Inparanoid score I2547
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - mtm6507
orthoMCL 1 0.900 - - OOG6_103571
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.930

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