DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8708 and vav1

DIOPT Version :10

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_002940062.1 Gene:vav1 / 100497964 XenbaseID:XB-GENE-6074281 Length:844 Species:Xenopus tropicalis


Alignment Length:193 Identity:41/193 - (21%)
Similarity:67/193 - (34%) Gaps:82/193 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 LIPAKADKNFWYWNYLYYKTDDGLDCCSDLAISFHYVAPNSFYVLDYLIYHLKPYGLLRSLEPLP 349
            |..|:||:::|          :|.:..|: .|.|.   |.|         |:|||    ...|:|
 Frog   627 LTKAEADQHWW----------EGRNTSSN-EIGFF---PCS---------HVKPY----VCNPVP 664

  Fly   350 AKLKVGQFLPPPVEARGR---LASNEDSADDYDRIYTTTTEKPKEPDAREMD-----SKEV---- 402
             .|.|..:...|:|.|..   ||:..|.         |...:.:..||.|..     ::||    
 Frog   665 -DLSVYTWYAGPMERRDAEVLLANRSDG---------TYLVRQRVKDAGEFAISIKFNQEVKHMK 719

  Fly   403 -----------EKEDAK--------YREKLSKE--------------DEEREDSRKTDNDSEY 432
                       ||:..|        |::...|:              :.|::|:.||:...:|
 Frog   720 VTSQGGLWRLTEKKGFKGLTDLIVYYQQNSLKDCFKLLDTMLQNPFKEPEKKDNPKTEKRMKY 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8708NP_610360.2 None
vav1XP_002940062.1 CH_VAV1 2..121 CDD:409111
RhoGEF 200..373 CDD:459876
PH_Vav 387..510 CDD:269930
C1_VAV1 512..568 CDD:410417
SH3_VAV1_1 596..658 CDD:212912 13/53 (25%)
SH2 665..767 CDD:472789 19/110 (17%)
SH3_VAV1_2 785..838 CDD:212909
Blue background indicates that the domain is not in the aligned region.

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