DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8708 and c1galt1

DIOPT Version :9

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_002938761.1 Gene:c1galt1 / 100487794 XenbaseID:XB-GENE-992000 Length:362 Species:Xenopus tropicalis


Alignment Length:345 Identity:162/345 - (46%)
Similarity:217/345 - (62%) Gaps:17/345 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 APRSKNRSVFTLIAGLVVGYCLAQIFSSI------APH---ESLYPYLSRRFSDSQVATGGQLAP 70
            ||.....|:.|...|:.:|:..:.:..||      :|.   |.|:.....|.||.  |..|....
 Frog     2 APAKSVLSLATFSFGIAIGFIFSYVIFSIVFEGQDSPQGKPEVLHNDPHGRHSDD--APAGPPLQ 64

  Fly    71 EQSGLKHD---HRNDNVSVAEQLKKEVRILCWVMTNPTNHKKKARHVKRTWGKRCNILLFMSSGA 132
            .|.....|   |.:::..||:.|..:|:|||||||.|.|..||.:|||.||.:|||.:|:|||..
 Frog    65 GQMDFNADAQQHHDEDTHVADDLYSKVKILCWVMTGPQNLDKKTKHVKATWAQRCNKVLYMSSEE 129

  Fly   133 DEELPTVKLDVGEGRENLWAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYNPET 197
            ::|.|||.||..|||:.|:.|..:||:||:.||..:||:|.|||||||.|::|:|::|..::|..
 Frog   130 NKEFPTVGLDTKEGRDQLYWKTIKAFQYVHDHHLEEADWFMKADDDTYVVLDNLRWLLSKHDPND 194

  Fly   198 PVHFGFKFKPFVKQGYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTVVNEDIEIGRCMENLNV 262
            ||:||.:|||:||||||||||||:||:|||:|||  .....:.|...:.| ||:.:|:||||:||
 Frog   195 PVYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFV--NAFKEEKCTHSSSV-EDLALGKCMENINV 256

  Fly   263 TAGDSRDEIGRGRMFPFIPEHHLIPAKADKNFWYWNYLYYKTDDGLDCCSDLAISFHYVAPNSFY 327
            .||||||..|:....||:||||||.....|.||||||.||...:|..||||||:|||||...:.|
 Frog   257 KAGDSRDTSGKETFHPFVPEHHLIHGYLPKTFWYWNYNYYPAVEGPGCCSDLAVSFHYVDSTTMY 321

  Fly   328 VLDYLIYHLKPYGLLRSLEP 347
            .|:||::||:|||......|
 Frog   322 QLEYLVHHLRPYGYKHRYSP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8708NP_610360.2 MIP-T3 <385..>449 CDD:287245
c1galt1XP_002938761.1 Galactosyl_T <168..>254 CDD:389837 48/88 (55%)
EEP 280..>361 CDD:382041 32/62 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3200
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 332 1.000 Inparanoid score I2383
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1407357at2759
OrthoFinder 1 1.000 - - FOG0000473
OrthoInspector 1 1.000 - - mtm9410
Panther 1 1.100 - - O PTHR23033
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X502
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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