DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8708 and LOC100486030

DIOPT Version :9

Sequence 1:NP_610360.2 Gene:CG8708 / 35792 FlyBaseID:FBgn0033271 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_002933747.2 Gene:LOC100486030 / 100486030 -ID:- Length:276 Species:Xenopus tropicalis


Alignment Length:251 Identity:128/251 - (50%)
Similarity:164/251 - (65%) Gaps:5/251 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MTNPTNHKKKARHVKRTWGKRCNILLFMSSGADEELPTVKLDVGEGRENLWAKVKEAFKYVYHHH 165
            ||.|:|.:.||.|||.||.:.||:.|||||..|:|.||:.|..||||:.|:.|...||.|.:.::
 Frog     1 MTGPSNLQTKAIHVKNTWTRHCNVALFMSSVTDKEFPTIGLGTGEGRDKLYWKTIRAFHYAHKYY 65

  Fly   166 YNDADFFYKADDDTYAVIENMRYMLYPYNPETPVHFGFKFKPFVKQGYMSGGAGYILSREALRRF 230
            .|:.|:|.||||||||:::|:|:||..|.|:.|::||.:||||.|||||||||||:||||||.||
 Frog    66 LNETDWFLKADDDTYAIVDNLRWMLSNYTPDQPIYFGKRFKPFFKQGYMSGGAGYVLSREALIRF 130

  Fly   231 VVEGIPNPKMCLPGTVVNEDIEIGRCMENLNVTAGDSRDEIGRGRMFPFIPEHHL-IPAKADKNF 294
             |||. ...:|...| ..||:.:|.||:.:.|.||||||...|....||.||..| :.....|..
 Frog   131 -VEGF-RTGICRHIT-PTEDVAMGNCMQLMGVIAGDSRDTEKRETFNPFAPESQLTVKYSEHKEN 192

  Fly   295 WYWNYLYYKTDDGLDCCSDLAISFHYVAPNSFYVLDYLIYHLKPYGL-LRSLEPLP 349
            |||.|.:|...:|..||||||||:||::|...|.|:|..||.:|||. .|...|||
 Frog   193 WYWVYCFYPIVEGPQCCSDLAISYHYISPELMYTLEYFTYHFRPYGYQYRYQPPLP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8708NP_610360.2 MIP-T3 <385..>449 CDD:287245
LOC100486030XP_002933747.2 Galactosyl_T 9..>159 CDD:304462 81/152 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H135611
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D555141at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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