DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lpin and lpin1

DIOPT Version :9

Sequence 1:NP_001188884.1 Gene:Lpin / 35790 FlyBaseID:FBgn0263593 Length:1089 Species:Drosophila melanogaster
Sequence 2:XP_012818603.2 Gene:lpin1 / 779950 XenbaseID:XB-GENE-1032881 Length:981 Species:Xenopus tropicalis


Alignment Length:1106 Identity:358/1106 - (32%)
Similarity:506/1106 - (45%) Gaps:319/1106 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVFSNFRDFYNDINAATLTGAIDVIVVEQRDGEFQCSPFHVRFGKLGVLRSREKVVDIEINGVPV 70
            :||...::.|..:|.|||:|.||||||.|.:|..|||||||||||:||||||||||||||||.||
 Frog    61 QVFVTVKELYRGLNPATLSGCIDVIVVRQPNGNMQCSPFHVRFGKMGVLRSREKVVDIEINGEPV 125

  Fly    71 DIQMKLGDSGEAFFVEECLEDEDEELPANLATSPIPNSFLASRDKANDTMEDISGVVTDKNASEE 135
            |:.|||||:||||||.| .|:.:|.:|::||||||                              
 Frog   126 DLHMKLGDNGEAFFVTE-QEENEEAIPSHLATSPI------------------------------ 159

  Fly   136 LLLPLPLPRRNSIDFSKEEPKEAVVEGSK-FENQVSDYTQRRHTDNTLERRNLSEKLKEFTTQKI 199
                                   ::||:. .|:|:              |||             
 Frog   160 -----------------------LLEGAALMESQL--------------RRN------------- 174

  Fly   200 RQEWAEHEELFQGEKKPADSDSLDNQSKASNEAETEKAIPAVIEDTEKEKDQIKPDVNLTTVTTS 264
            ..:|            |...||.|....:|:                         ::|    .:
 Frog   175 SMDW------------PRSLDSSDPSQPSSS-------------------------MHL----AA 198

  Fly   265 EATKEVSKSKTKKRRKKSQMKKNAQRKNSSSSSLGSAGGGDLPSAETPSLGVSNIDEGDAPISSA 329
            ...:.:|..|.:|||:||:: .|.:|:::..:|         ...:..::.:|:.:|.| |:   
 Frog   199 SGAENLSVKKRRKRRRKSKV-DNLKREDNCDTS---------EDEDMFTIDMSSDEECD-PL--- 249

  Fly   330 TNNNNTSSSNDEQLSAP--LVTARTGDDSPLSEI---PH-----TPTSNPRLDLDIHFFSDTEIT 384
                :||.|     .||  .:....|..||..:.   ||     :|..:..|...:   :...:.
 Frog   250 ----DTSKS-----MAPSSYIDMNQGGKSPFGKAEAHPHSDGEWSPLKSKSLGRKV---TSAPLH 302

  Fly   385 TPVGGGGAGS-------GRAA----GGRPSTPIQSDSELETTMRDNRHVVTEESTASWKWGELPT 438
            .|..||.:.|       .||:    |.||:|| :|||||.:...: |.:.|.|....|.|||||.
 Frog   303 VPPEGGLSSSCPPQRCFPRASDSPPGSRPATP-KSDSELVSKPLE-RGLSTSELPMHWAWGELPQ 365

  Fly   439 P-----EQAKNEAMSAAQVQQSEHQSML----------------SNMFSFMKRANRL-------- 474
            .     .:||..:..:..:.:|.|..::                |...|.:....||        
 Frog   366 ATKSHLHKAKESSTVSINMTESTHFRIIPSTTNVGAGSSPELGESQTISLVLDDARLNPPPPLIT 430

  Fly   475 ---------------------------------------RKEKGVGEVG--DIYLSDLDAGSMDP 498
                                                   :|:|....:|  .:||.|:..  |||
 Frog   431 EPDIESLGAAAPPLPYDEEPSPRSPGLVSPAGKTDSPSKKKDKRSRHLGADGVYLDDITC--MDP 493

  Fly   499 EMAALYFPSPLSKAASPPEEDGESGNGTSLPHSPSSLEEGQKSIDSDFDETKQQRDNNRYLDFVA 563
            |:||||||.. ...|:|.:...|:| |.|...||.|:  |...:||..:...   |..|.|..::
 Frog   494 EVAALYFPKS-GDTAAPGKSVNENG-GRSANQSPQSV--GSSGVDSGVESIS---DGIRDLPSIS 551

  Fly   564 MSMCGMSEQGAPPSDEEFDRHLVNYPDVCKSPSIFSSPNLVVRLNGKYYTWMAACPIVMTMITFQ 628
            :|:||........:.|:|....|.|.....:|:|...||||:::..|||.|..|.|:::.|..||
 Frog   552 ISLCGGLTDNKEITKEQFIEQAVTYQQFVDNPAIIDDPNLVIKIGNKYYNWPTAAPLLLAMQAFQ 616

  Fly   629 KPLTHDAIEQLMSQTVDGKCLPGDEKQEAVAQADNGGQTKRYWWSWRR-----SQDAAPNH-LNN 687
            |||....|:.||...:..|                ||   |:|:|||.     ..:|.|:. ||.
 Frog   617 KPLPKVTIDTLMRDKMPKK----------------GG---RWWFSWRGRNTNIKSEAKPDQGLNG 662

  Fly   688 ----THGMPLG-------KDEKDGDQAAVATQTSRPTSPDITDPTLSKSDSLVNAENTSALVDNL 741
                :.|.|:|       |||.                        |.||     |:......::
 Frog   663 NGPYSGGQPVGSSLENRIKDES------------------------SSSD-----EDPRGAKQSI 698

  Fly   742 EELTMASNKSDEPKERYKKSLRLSSAAIKKLNLKEGMNEIEFSVTTAYQGTTRCKCYLFRWKHND 806
            ..|......:..|...|||:|||:|..:|.|.||.|.|::.|||||.||||.||:..::.|..:|
 Frog   699 GSLQSNQTHNSSPGITYKKTLRLTSDQLKSLKLKNGPNDVVFSVTTQYQGTCRCEGTIYLWNWDD 763

  Fly   807 KVVISDIDGTITKSDVLGHILPMVGKDWAQLGVAQLFSKIEQNGYKLLYLSARAIGQSRVTREYL 871
            |::|||||||||:||.||||||.:||||...|:|:|:.|:.|||||.||.||||||.:.:||.||
 Frog   764 KIIISDIDGTITRSDTLGHILPTLGKDWTHQGIAKLYHKVSQNGYKFLYCSARAIGMADMTRGYL 828

  Fly   872 RSIRQGNVMLPDGPLLLNPTSLISAFHREVIEKKPEQFKIACLSDIRDLF-PDKEPFYAGYGNRI 935
            ..:.:...:||.||:||:|:||.||.||||||||||:|||.||:||::|| |::|||||.:|||.
 Frog   829 HWVNERGTVLPQGPVLLSPSSLFSALHREVIEKKPEKFKIECLTDIKNLFQPNEEPFYAAFGNRA 893

  Fly   936 NDVWAYRAVGIPIMRIFTINTKGELKHELTQTFQSSGYINQSLEVDEYFPLLTNQDEFDYR-TDI 999
            .||::|:.||:.:.||||:|.||||..|..:| ..|.|:.....||..||||...:..|:. :||
 Frog   894 TDVYSYKEVGVSLNRIFTVNPKGELIQEHAKT-NISSYVRLCEVVDHIFPLLKRSNSSDFPCSDI 957

  Fly  1000 F 1000
            :
 Frog   958 Y 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpinNP_001188884.1 Lipin_N 1..103 CDD:282436 63/96 (66%)
Lipin_mid 562..671 CDD:293481 32/108 (30%)
LNS2 760..985 CDD:285447 126/225 (56%)
lpin1XP_012818603.2 Lipin_N 52..158 CDD:398325 64/97 (66%)
Lipin_mid 550..641 CDD:407117 32/109 (29%)
LNS2 717..942 CDD:400509 126/225 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 269 1.000 Domainoid score I1813
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 520 1.000 Inparanoid score I1240
OMA 1 1.010 - - QHG51957
OrthoDB 1 1.010 - - D405645at33208
OrthoFinder 1 1.000 - - FOG0001100
OrthoInspector 1 1.000 - - otm48554
Panther 1 1.100 - - O PTHR12181
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R805
SonicParanoid 1 1.000 - - X664
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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