DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lpin and Lpin3

DIOPT Version :10

Sequence 1:NP_610359.2 Gene:Lpin / 35790 FlyBaseID:FBgn0263593 Length:1089 Species:Drosophila melanogaster
Sequence 2:NP_075021.1 Gene:Lpin3 / 64899 MGIID:1891342 Length:848 Species:Mus musculus


Alignment Length:1020 Identity:350/1020 - (34%)
Similarity:492/1020 - (48%) Gaps:221/1020 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFSNFRDFYNDINAATLTGAIDVIVVEQRDGEFQCSPFHVRFGKLGVLRSREKVVDIEINGVPVD 71
            ||...::.|..:|.|||:|.|||:||.||||.|:|||||||||||||||||||||||||||.|||
Mouse    11 VFGTVKELYRGLNPATLSGGIDVLVVRQRDGSFRCSPFHVRFGKLGVLRSREKVVDIEINGEPVD 75

  Fly    72 IQMKLGDSGEAFFVEECLEDEDEELPANLATSPIPNSFLASRDKANDTMEDISGVVTDKNASEEL 136
            :.||||||||||||:| |:.::|::|..|.|||||             ...:||..:|....   
Mouse    76 LHMKLGDSGEAFFVQE-LDSDEEDVPPRLCTSPIP-------------WGGLSGFPSDSQIG--- 123

  Fly   137 LLPLPLPRRNSIDFSKEEPKEAVVEGSKFENQVSDYTQRRHTDNTLERRNLSEKLKEFTTQKIRQ 201
                          :..||:..|:.|            ||......:.|...|...:.:::::  
Mouse   124 --------------TASEPEGLVITG------------RRKRRRRRKPRRREEDAVDSSSEEL-- 160

  Fly   202 EWAEHEELFQGEKKPADSDSLDNQSKASNEAETEKAIPAVIEDTEKEKD-QIKPDVNLTT----V 261
            |.....||...||...:|.|       :.|||...:.|   :|.....| :..|..||::    .
Mouse   161 EAGAESELTLLEKPTPESPS-------AQEAEEPSSQP---KDIHPYSDGECTPQANLSSGDLMS 215

  Fly   262 TTSEATKEVSKSKTKKRRKKSQMK-------KNAQRKNSSSSSLGSAGGGDLPSAETPSLGVSNI 319
            ..|::..|:...:....|.:|.|:       |.|:.:....|.:          .|:.:..:..:
Mouse   216 PKSDSELELRSLEPSPLRAESHMQWVWGRLPKVAKAERPEFSLI----------LESMAEAICAL 270

  Fly   320 DEGDAPISSATNNNNTSSSNDEQLSAPLVTARTGDDSPLSEIPHTPTSNPRLDLDIHFFSDTEIT 384
            .|..:|.||      .|.:..:.||.|::......|          |.:|.::...   .:|.: 
Mouse   271 PEEPSPSSS------PSEAGVDTLSPPVLHPGVRAD----------TFHPAVEAHC---EETAV- 315

  Fly   385 TPVGGGGAGSGRAAGGRPSTPIQSDSELETTMRDNRHVVTEESTASWKWGELPTPEQAKNEAMSA 449
                              .:|:.:....||..:::|......:|.||.|   .|||  .:.....
Mouse   316 ------------------DSPLAAPESKETKTQNSRGAGHPPATKSWSW---TTPE--SHTPSGH 357

  Fly   450 AQVQQSEHQSMLSNMFSFMKRANRLRKEKGVGEVGDIYLSDLDAGSMDPEMAALYFPSPLSKAAS 514
            .||.:.:               ..|::.:.:|. .||||.||.  |:|.|..|||||.       
Mouse   358 PQVSRGK---------------GSLKRNQHLGP-SDIYLDDLP--SLDSENVALYFPK------- 397

  Fly   515 PPEEDGESGNGTSLPHSPSSLEEGQKSIDSDFDE--TKQQRDNNRYLDFVAMSMCGMSEQGAPPS 577
                 .|.|.|......||:    ||.::|...|  .:...|:   :|.:.:|:||........|
Mouse   398 -----SEYGMGARRWSEPSN----QKLLESPNPEHIAECTLDS---VDKIELSLCGGLADNRDIS 450

  Fly   578 DEEFDRHLVNYPDVCKSPSIFSSPNLVVRLNGKYYTWMAACPIVMTMITFQKPLTHDAIEQLMSQ 642
            .|:|.:|:|:|.|:.|:|.:...|||||::|.|:|.|..|.|:::::..|||.|....:::|..:
Mouse   451 LEKFTQHMVSYEDLTKNPGLLDDPNLVVKINEKHYNWAVAAPMILSLQAFQKNLPESTVDKLEKE 515

  Fly   643 TVDGKCLPGDEKQEAVAQADNGGQTKRYWWSWRRSQDAAPNHLNNTHGMPLGKDEKDGDQAAV-A 706
            .:..|                ||   |:|:||||....|..|.:........|.:  |::..| :
Mouse   516 KMPRK----------------GG---RWWFSWRRRDFPAEEHSSQREKAATRKQQ--GEKTEVLS 559

  Fly   707 TQTSRPTSPDITD-PTLSKSDSLVNAENTSALVDNLEELTMASNKSDEPKERYKKSLRLSSAAIK 770
            :....|.||.|.: |.|..|        |...|..                 |||||||||..|:
Mouse   560 SDDDVPDSPVILEVPPLPSS--------TPGYVPT-----------------YKKSLRLSSDQIR 599

  Fly   771 KLNLKEGMNEIEFSVTTAYQGTTRCKCYLFRWKHNDKVVISDIDGTITKSDVLGHILPMVGKDWA 835
            .|||.||.|::.|||||.||||.|||..::.|..:||||||||||||||||.||||||.:||||.
Mouse   600 CLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISDIDGTITKSDALGHILPQLGKDWT 664

  Fly   836 QLGVAQLFSKIEQNGYKLLYLSARAIGQSRVTREYLRSIRQGNVMLPDGPLLLNPTSLISAFHRE 900
            ..|:..|:.||..||||.||.||||||.:.:|:.||:.:.:....||.||:||:|:||.||.|||
Mouse   665 HQGITSLYHKIHLNGYKFLYCSARAIGMADLTKGYLQWVSEHGCGLPKGPILLSPSSLFSALHRE 729

  Fly   901 VIEKKPEQFKIACLSDIRDLF-PDKEPFYAGYGNRINDVWAYRAVGIPIMRIFTINTKGELKHEL 964
            |||||||.||:||||||:.|| |.::||:|.:|||.|||:|||.||:|..||||:|.:|||..||
Mouse   730 VIEKKPEVFKVACLSDIQQLFLPQRQPFHAAFGNRPNDVFAYRQVGLPESRIFTVNPRGELIQEL 794

  Fly   965 TQ----TFQSSGYINQSLEVDEYFPLLTNQDEFDYRTDIFDDEES 1005
            .:    |:|..|.:     |:..||.:.....    ||:...|.|
Mouse   795 IKSHKSTYQRLGEV-----VELLFPPVVRGPS----TDLASPEYS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpinNP_610359.2 Lipin_N 1..104 CDD:461356 66/96 (69%)
Lipin_mid 562..674 CDD:465292 33/111 (30%)
LNS2 760..985 CDD:462403 133/229 (58%)
Lpin3NP_075021.1 N-LIP. /evidence=ECO:0000250 1..108 67/97 (69%)
Lipin_N 1..107 CDD:461356 66/96 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..233 37/189 (20%)
Nuclear localization signal. /evidence=ECO:0000255 135..144 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..298 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..373 14/97 (14%)
Lipin_mid 435..528 CDD:465292 33/111 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 536..568 5/33 (15%)
C-LIP. /evidence=ECO:0000250 587..789 126/201 (63%)
LNS2 589..814 CDD:462403 133/229 (58%)
DXDXT motif 641..645 3/3 (100%)
LXXIL motif 652..656 3/3 (100%)

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