DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpin and Y54F10AR.1

DIOPT Version :10

Sequence 1:NP_610359.2 Gene:Lpin / 35790 FlyBaseID:FBgn0263593 Length:1089 Species:Drosophila melanogaster
Sequence 2:NP_497582.3 Gene:Y54F10AR.1 / 190268 WormBaseID:WBGene00021854 Length:270 Species:Caenorhabditis elegans


Alignment Length:211 Identity:41/211 - (19%)
Similarity:68/211 - (32%) Gaps:72/211 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   717 ITDPTLSKSDSLVNAENTSALVDNLEELTMASNKSDEPKERYKKSLRLSSAAIKKLNLKEGMNEI 781
            :|:|...|.:..|..| |..|.||.........|.||..:|...::.::       |..|.:|..
 Worm   103 VTNPDYMKENFYVKIE-TIHLPDNGTTENAHGLKGDELAKREVVNINIA-------NDHEYLNSG 159

  Fly   782 EF---SVTTAYQGTTRCKCYLF-RWKHNDKVVISDIDGTITKSDVLGHILPMVGKDWAQLGVAQL 842
            :.   |..:.:|.|...:..|. .||.:.:.|:.                               
 Worm   160 DLHPDSTPSKFQSTKTGRGPLSGNWKDSVQPVMC------------------------------- 193

  Fly   843 FSKIEQNGYKLLYLSARAIGQSRVTREYLRSIRQGNVMLPDGPLLLNPTSLISAFHREV---IEK 904
                   .|||:.:..:..|..::...|      .:...|         .|.|.|||||   |:|
 Worm   194 -------AYKLVTVYFKWFGFQKIVENY------AHTQYP---------RLFSKFHREVFCWIDK 236

  Fly   905 KPEQFKIACLSDIRDL 920
                :....:.|||::
 Worm   237 ----WHGLTMVDIREI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpinNP_610359.2 Lipin_N 1..104 CDD:461356
Lipin_mid 562..674 CDD:465292
LNS2 760..985 CDD:462403 28/168 (17%)
Y54F10AR.1NP_497582.3 SRPBCC 2..261 CDD:472699 41/211 (19%)
Blue background indicates that the domain is not in the aligned region.

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