DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpin and Y71G12B.17

DIOPT Version :9

Sequence 1:NP_001188884.1 Gene:Lpin / 35790 FlyBaseID:FBgn0263593 Length:1089 Species:Drosophila melanogaster
Sequence 2:NP_490879.2 Gene:Y71G12B.17 / 171730 WormBaseID:WBGene00022155 Length:272 Species:Caenorhabditis elegans


Alignment Length:92 Identity:27/92 - (29%)
Similarity:34/92 - (36%) Gaps:13/92 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 TWMA--ACPIVMTMITFQKPLTHDAIE--QLMSQTVDGKCLPGDEKQEAV----AQADNGGQTKR 669
            :|.|  .|..|:|...:.|...|..||  .|.........|.|.||:|.|    |..|..| ||.
 Worm    92 SWNAYPYCKTVLTNPGYMKDNFHQIIETIHLDDNGSSENPLDGPEKREIVFIDIADNDIFG-TKN 155

  Fly   670 YWWSWRRSQDAAPNHLNNTHGMPLGKD 696
            |    .:.:||...........||.:|
 Worm   156 Y----EKEKDARLFEAETVERGPLDED 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LpinNP_001188884.1 Lipin_N 1..103 CDD:282436
Lipin_mid 562..671 CDD:293481 21/65 (32%)
LNS2 760..985 CDD:285447
Y71G12B.17NP_490879.2 IP_trans 3..247 CDD:280315 27/92 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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