DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp44a and Obp56e

DIOPT Version :9

Sequence 1:NP_001286186.1 Gene:Obp44a / 35789 FlyBaseID:FBgn0033268 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_611445.1 Gene:Obp56e / 37267 FlyBaseID:FBgn0034471 Length:132 Species:Drosophila melanogaster


Alignment Length:133 Identity:32/133 - (24%)
Similarity:55/133 - (41%) Gaps:19/133 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VAILLCALLGLASASDYKL---RTAEDLQSARKECAASSKVTEALIAKYKTFDYPDDD-ITRNYI 65
            |..:..||..|:.||...|   :.||..|.| |.|.....:|:......::.::.|.| ..:.:.
  Fly     3 VFFVFAALAALSLASAVGLTDSQKAEAKQRA-KACVKQEGITKEQAIALRSGNFADSDPKVKCFA 66

  Fly    66 QCIFVKFDLFDEAKG-FKVENLVAQL----GQGKEDKAALKADIEKCADKNEQKSPANEWAFRGF 125
            .|...:..|.  |.| .|.:.::|:|    |:....:...|.|..|.|||.:.       ::..:
  Fly    67 NCFLEQTGLV--ANGQIKPDVVLAKLGPIAGEANVKEVQAKCDSTKGADKCDT-------SYLLY 122

  Fly   126 KCF 128
            ||:
  Fly   123 KCY 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp44aNP_001286186.1 PhBP 32..132 CDD:214783 22/103 (21%)
Obp56eNP_611445.1 PBP_GOBP 21..128 CDD:279703 26/115 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.