Protein Alignment Pabp2 and GR-RBP5

DIOPT Version :10

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_177563.1
• Gene: GR-RBP5 / 843763
• AraportID: AT1G74230
• Length: 289
• Species: Arabidopsis thaliana
• Alignment Length: 177
• Identity: 39/177 - (22%)
• Similarity: 65/177 - (36%)
• Gaps: 48/177 - (27%)

  Fly    60 KIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINR 124
            |:.::.|:....:...|:        .|:..:.:.:..::||.:.|......|...|...|.:..
plant     6 KVGRLFSQTSSHVTASSS--------MLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVD 62

  Fly   125 VTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFA--RG 187
            ..|:.::..|..:|||::.|.|.|....|:.::.....||:|:|              .:|  ||
plant    63 AKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRV--------------NYATERG 113

  Fly   188 S-FRGRGARVSRACCHSTFRG------------ARRAMGYRGRANYY 221
            | |.|||           |.|            ...|.||.|.|..|
plant   114 SGFGGRG-----------FGGPGGGYGASDGGYGAPAGGYGGGAGGY 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	DNA_pol_phi	<3..68	CDD:461488	2/7 (29%)
		RRM_II_PABPN1	97..172	CDD:409966	19/74 (26%)
GR-RBP5	NP_177563.1	RRM	33..111	CDD:440488	20/91 (22%)