DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Pabp2 and AT5G03480

DIOPT Version :9

Sequence 1:	NP_476902.1	Gene:	Pabp2 / 35788	FlyBaseID:	FBgn0005648	Length:	224	Species:	Drosophila melanogaster
Sequence 2:	NP_195968.1	Gene:	AT5G03480 / 831825	AraportID:	AT5G03480	Length:	321	Species:	Arabidopsis thaliana

Alignment Length:	176	Identity:	37/176 - (21%)
Similarity:	64/176 - (36%)	Gaps:	34/176 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    14 LESLEETNGEQETEIATEVEEEGSMQIDPELEAIKARV------------------KEMEEEAEK 60
            |:|| |.|...:...:|.:..||   .|..|:....|:                  ::.:::..|
plant     9 LKSL-ELNDSDKQSTSTAICVEG---YDTSLKEYPLRLALTKHFASCGEITQIYVPRDFKKKILK 69

  Fly    61 ------IKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEE------LE 113
                  ||...:|.......|:..|..||.:..:.|.|..:....:....|..|.::      ||
plant    70 SVSFMWIKGEGAEDKALQLSGTDVGGWTVIVKPKPKHEPPSPITTISVEGYDTSLQKYLLELILE 134

  Fly   114 AHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNET 159
            .||..||.|..|.:..:...|..|..|::....:...:.||.::.|
plant   135 KHFDSCGEIRHVYVPTDYERGVLKSVAFLRIEGEGAEDKALQLSGT 180

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	RRM	<43..>172	CDD:223796	28/147 (19%)
Pabp2	NP_476902.1	RRM_II_PABPN1	97..172	CDD:240994	16/69 (23%)
AT5G03480	NP_195968.1	RRM_SF	26..102	CDD:302621	13/78 (17%)
		RRM_SF	114..192	CDD:302621	16/67 (24%)
		RRM_SF	217..284	CDD:302621
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23236
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100