| Sequence 1: | NP_476902.1 | Gene: | Pabp2 / 35788 | FlyBaseID: | FBgn0005648 | Length: | 224 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_196048.1 | Gene: | AtRZ-1c / 830307 | AraportID: | AT5G04280 | Length: | 310 | Species: | Arabidopsis thaliana |
| Alignment Length: | 171 | Identity: | 40/171 - (23%) |
|---|---|---|---|
| Similarity: | 58/171 - (33%) | Gaps: | 52/171 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 98 VYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETL-- 160
Fly 161 FRGRQI--KVMSKRTNRPGLSTTNRFARGSFRGR------------------GARVSRACCHSTF 205
Fly 206 R------------GAR---------RAMGY---RGRANYYA 222 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Pabp2 | NP_476902.1 | DNA_pol_phi | <3..68 | CDD:461488 | |
| RRM_II_PABPN1 | 97..172 | CDD:409966 | 20/77 (26%) | ||
| AtRZ-1c | NP_196048.1 | RRM | 8..89 | CDD:440488 | 22/85 (26%) |
| zf-CCHC | 128..143 | CDD:395050 | 2/14 (14%) | ||
| U2AF_lg | 170..>256 | CDD:273727 | 2/4 (50%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||