Protein Alignment Pabp2 and AT2G22100

DIOPT Version :10

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_565526.1
• Gene: AT2G22100 / 816745
• AraportID: AT2G22100
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 218
• Identity: 43/218 - (19%)
• Similarity: 83/218 - (38%)
• Gaps: 44/218 - (20%)

  Fly     4 EDITLNEDQLLESLEETNGEQE--------TEIATEVEEE---GSMQIDP-ELEAIKARVKEMEE 56
            |::.:.|.::.:..:..:.|:|        ::...|||||   .|....| :.:..|.:.|...:
plant    27 EELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESKKKHKRSSD 91

  Fly    57 EAEKI--------------KQMQSEVDKQ-----MAGGSTTGLATVPLSLEEK------------ 90
            |:|:|              .....|.||:     :...|...|..:.....||
plant    92 ESEEIVDSKPVTVPIVTIESDSDFEFDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESA 156

  Fly    91 -QEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
             ::...|:::|..:.:..:.|.|:|.|...|.|...:::.:|..|..|||.::.|.:::....||
plant   157 DRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAAL 221

  Fly   155 AMNETLFRGRQIKVMSKRTNRPG 177
            ...|.....|.:..:..|....|
plant   222 KNPEKRMYNRTVSCLPARPFNSG 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	DNA_pol_phi	<3..68	CDD:461488	16/89 (18%)
		RRM_II_PABPN1	97..172	CDD:409966	17/74 (23%)
AT2G22100	NP_565526.1	PABP-1234	<164..>353	CDD:130689	19/81 (23%)
		RRM_SF	165..235	CDD:473069	17/69 (25%)