Protein Alignment Pabp2 and LOC4576768

DIOPT Version :10

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: XP_001237856.3
• Gene: LOC4576768 / 4576768
• VectorBaseID: AGAMI1_002317
• Length: 361
• Species: Anopheles gambiae
• Alignment Length: 186
• Identity: 42/186 - (22%)
• Similarity: 67/186 - (36%)
• Gaps: 32/186 - (17%)

  Fly    61 IKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTR-------SVYVGNVDYGASAEELEAHFHG 118
            :.:....:||.:|.|.         .:...:::|.:       .::||.:....|.||::..|..
Mosquito   115 VYKASDSIDKVVAAGE---------HVLNNKKVDPKRAKARPGKIFVGGLTSDISDEEIKTFFGQ 170

  Fly   119 CGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRP------- 176
            .|||..|.:..:|.....|||.:|.:.|.:.|...|...:....|:::.| .|.|.:|
Mosquito   171 FGTIVEVELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDV-KKATPKPDGQMGGM 234

  Fly   177 ------GLSTTNRFA--RGSFRGRGARVSRACCHSTFRGARRAMGYRGRANYYAPY 224
                  |:....|..  ||...|||....|......|.|.....|..|....|..|
Mosquito   235 GGGGGMGMGGGGRGGNMRGGMPGRGGMRGRGGPKGGFGGGGGGWGGPGGYGGYDSY 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	DNA_pol_phi	<3..68	CDD:461488	0/6 (0%)
		RRM_II_PABPN1	97..172	CDD:409966	20/74 (27%)
LOC4576768	XP_001237856.3	None