Protein Alignment Pabp2 and PABPN1L

DIOPT Version :9

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_001372638.1
• Gene: PABPN1L / 390748
• HGNCID: 37237
• Length: 297
• Species: Homo sapiens
• Alignment Length: 106
• Identity: 40/106 - (37%)
• Similarity: 55/106 - (51%)
• Gaps: 18/106 - (16%)

  Fly    15 ESLEETNGEQETE-----IATEVEEEGSMQI---DPELEAIKARVKEMEEEAEKIK-----QMQS 66
            |..||.:.|::.:     :.:.:|:|...:.   |.||||||.:|..| |:||...     |.|:
Human    50 EKEEEEDAEEDQDGDAGFLLSLLEQENLAECPLPDQELEAIKMKVCAM-EQAEGTPRPPGVQQQA 113

  Fly    67 EVDKQMAGGSTTGLATV--PLS--LEEKQEIDTRSVYVGNV 103
            |.::..|.|......||  |||  .|||.|.|.|||||||:
Human   114 EEEEGTAAGQLLSPETVGCPLSGTPEEKVEADHRSVYVGNL 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	RRM	<43..>172	CDD:223796	33/70 (47%)
		RRM_II_PABPN1	97..172	CDD:240994	6/7 (86%)
PABPN1L	NP_001372638.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	21..66		4/15 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	101..128		6/26 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412946at2759
OrthoFinder	1	1.000	-	-		FOG0001228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23236
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X689
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	7	6.880