Sequence 1: | NP_476902.1 | Gene: | Pabp2 / 35788 | FlyBaseID: | FBgn0005648 | Length: | 224 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007463.1 | Gene: | Pabpn1l / 382035 | MGIID: | 2685954 | Length: | 273 | Species: | Mus musculus |
Alignment Length: | 244 | Identity: | 92/244 - (37%) |
---|---|---|---|
Similarity: | 126/244 - (51%) | Gaps: | 42/244 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 ADEDITLNEDQ--LLESLEETNGEQETEIATEVEEEGSMQIDPELEAIKARV------------- 51
Fly 52 ----KEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEEL 112
Fly 113 EAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPG 177
Fly 178 LSTTNRFARGSFRGRGARVSRACCH--STFRGARRAMGYRGRANYYAPY 224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pabp2 | NP_476902.1 | RRM | <43..>172 | CDD:223796 | 64/145 (44%) |
RRM_II_PABPN1 | 97..172 | CDD:240994 | 47/74 (64%) | ||
Pabpn1l | NP_001007463.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 22..57 | 1/5 (20%) | |
RRM | <134..>227 | CDD:223796 | 57/101 (56%) | ||
RRM_SF | 144..220 | CDD:302621 | 48/75 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4209 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001228 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23236 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X689 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.870 |