Sequence 1: | NP_476902.1 | Gene: | Pabp2 / 35788 | FlyBaseID: | FBgn0005648 | Length: | 224 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023366.1 | Gene: | T08B6.9 / 3564899 | WormBaseID: | WBGene00020356 | Length: | 531 | Species: | Caenorhabditis elegans |
Alignment Length: | 226 | Identity: | 49/226 - (21%) |
---|---|---|---|
Similarity: | 75/226 - (33%) | Gaps: | 82/226 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 DITLNEDQLLES-------LEETNGEQETEIATEVEEEGSMQIDPELEAIKARVK--------EM 54
Fly 55 EEEAEKIKQMQSEVDKQMAG----GSTTGLATVPLSLEE--KQEIDTRSVY-------------- 99
Fly 100 --VGNVDYGASAEELEAHFHGC----------------------GTINRVTILCNKADGHPKGFA 140
Fly 141 YIEFGSKEFVET---ALAMNET---LFRGRQ 165 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pabp2 | NP_476902.1 | RRM | <43..>172 | CDD:223796 | 41/181 (23%) |
RRM_II_PABPN1 | 97..172 | CDD:240994 | 23/113 (20%) | ||
T08B6.9 | NP_001023366.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4209 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |