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Protein Alignment Pabp2 and pab2
DIOPT Version :9
Sequence 1: | NP_476902.1 |
Gene: | Pabp2 / 35788 |
FlyBaseID: | FBgn0005648 |
Length: | 224 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_595794.1 |
Gene: | pab2 / 2539733 |
PomBaseID: | SPBC16E9.12c |
Length: | 166 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 184 |
Identity: | 85/184 - (46%) |
Similarity: | 107/184 - (58%) |
Gaps: | 28/184 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 DPELEAIKARVKEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDY 105
:.||..:|.||.|||.||.|::.||.::|.: |..|. .:|:.||.:|||||||||
pombe 11 EKELLEMKERVAEMEAEAAKLRAMQEQLDNE-----TEALR------NDKESIDAQSVYVGNVDY 64
Fly 106 GASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMS 170
..:.|||::||..||::|||||||:|..|||||||||||.....|..||.:|.::...|.:||..
pombe 65 SVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHERPLKVTP 129
Fly 171 KRTNRPGLSTTNRFARGSFRGRGARVSRACCHSTFRGARRAMGYRGRANYYAPY 224
||||.||:|......||..|||| || ||||||..:|||
pombe 130 KRTNVPGMSRGRGRGRGRGRGRG------------RG-----GYRGRARGFAPY 166
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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