Protein Alignment Pabp2 and ZK1225.5

DIOPT Version :9

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_493317.1
• Gene: ZK1225.5 / 173186
• WormBaseID: WBGene00014239
• Length: 511
• Species: Caenorhabditis elegans
• Alignment Length: 62
• Identity: 12/62 - (19%)
• Similarity: 26/62 - (41%)
• Gaps: 9/62 - (14%)

  Fly    24 QETEIATEVEEEGSMQIDPELEAIK--ARVKEMEEEAEKI-------KQMQSEVDKQMAGGS 76
            :.|:|..::.|....::|...:..|  ..:..|:.|...|       ..:.:::|.|:..||
 Worm   199 ENTDIFLDLHETDPERVDTRKKVFKHFYELFTMDREESVIPFNWLSYTGVSADLDIQVCHGS 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	RRM	<43..>172	CDD:223796	8/43 (19%)
		RRM_II_PABPN1	97..172	CDD:240994
ZK1225.5	NP_493317.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900