Sequence 1: | NP_476902.1 | Gene: | Pabp2 / 35788 | FlyBaseID: | FBgn0005648 | Length: | 224 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_493316.1 | Gene: | ZK1225.4 / 173185 | WormBaseID: | WBGene00014238 | Length: | 519 | Species: | Caenorhabditis elegans |
Alignment Length: | 256 | Identity: | 50/256 - (19%) |
---|---|---|---|
Similarity: | 85/256 - (33%) | Gaps: | 97/256 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 TEVEEEGS--------------MQIDPE-LEAIKARVKEMEE---EAEKI--------------K 62
Fly 63 QMQSEVD-----KQMA-------------------GGSTTGLATVPLSLEEKQEID-TRSVYVGN 102
Fly 103 VDYGASAE-----ELEAHFHGC--GTINRVTILC-----NKADGHPK-GFAYIE-FGSK------ 147
Fly 148 ------EFVETALAMNETLF-------RGRQIKVMSKRTNRPGLSTT----NRFARGSFRG 191 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pabp2 | NP_476902.1 | RRM | <43..>172 | CDD:223796 | 37/204 (18%) |
RRM_II_PABPN1 | 97..172 | CDD:240994 | 22/107 (21%) | ||
ZK1225.4 | NP_493316.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4209 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |