Protein Alignment Pabp2 and DAZL

DIOPT Version :10

• Sequence 1: NP_476902.1
• Gene: Pabp2 / 35788
• FlyBaseID: FBgn0005648
• Length: 224
• Species: Drosophila melanogaster
• Sequence 2: NP_001177740.1
• Gene: DAZL / 1618
• HGNCID: 2685
• Length: 315
• Species: Homo sapiens
• Alignment Length: 122
• Identity: 25/122 - (20%)
• Similarity: 58/122 - (47%)
• Gaps: 3/122 - (2%)

  Fly    48 KARV-KEMEEEAEKIKQMQSEVDKQMAGGSTTGLATVPLSLEEKQEIDTRSVYVGNVDYGASAEE 111
            |||: ..:..|:....:..:....:.|...::..||....:..:.:|...:|:||.:|......|
Human    11 KARLTPSLPHESTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETE 75

  Fly   112 LEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKV 168
            :.:.|...|::..|.|:.::. |..||:.::.|.:...|: .:..::..|.|:::|:
Human    76 IRSFFARYGSVKEVKIITDRT-GVSKGYGFVSFFNDVDVQ-KIVESQINFHGKKLKL 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pabp2	NP_476902.1	DNA_pol_phi	<3..68	CDD:461488	4/20 (20%)
		RRM_II_PABPN1	97..172	CDD:409966	17/72 (24%)
DAZL	NP_001177740.1	RRM_DAZL	55..136	CDD:410073	18/78 (23%)
		PABP-1234	<60..228	CDD:130689	17/73 (23%)