DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp49 and SNAPC3

DIOPT Version :10

Sequence 1:NP_610357.1 Gene:Pbp49 / 35787 FlyBaseID:FBgn0260398 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001034786.1 Gene:SNAPC3 / 6619 HGNCID:11136 Length:411 Species:Homo sapiens


Alignment Length:372 Identity:102/372 - (27%)
Similarity:163/372 - (43%) Gaps:50/372 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSLRD---------FLADYQKKISGTADEVPFFLQKNPVLVDVSESCSLDLIESPDDSSIAVFQP 67
            ||||:         ..||..::.:..|.::...|:   ...::...|.||.::..:|..      
Human    61 LSLREPPASALPGSQAADSDREDAAVARDLDCSLE---AAAELRAVCGLDKLKCLEDGE------ 116

  Fly    68 AADKCRPTFSPPQENQHVPSTFTALSQHKDKS----RKC---PFGRTQYSHKLNPTPTDSPNLHI 125
                 .|...|...:...........:|::::    |.|   .|.....||.:...|.:|.::..
Human   117 -----DPEVIPENTDLVTLGVRKRFLEHREETITIDRACRQETFVYEMESHAIGKKPENSADMIE 176

  Fly   126 DACGELELTVR-LYRPPRAYHRGFKVEIPVFAEEFVCLGSNYLTELRDKISCVCNGKRFVDISDD 189
            :  |||.|:|. ||  |..:|: .|...|.  :..:.|||..||:|||.|.||.:.:...:.|:.
Human   177 E--GELILSVNILY--PVIFHK-HKEHKPY--QTMLVLGSQKLTQLRDSIRCVSDLQIGGEFSNT 234

  Fly   190 PDAPLPSIDTN---PGYFFINDTFYNDQRNPDNPDYSKTVLQWAARANGVNGETLKVESMEGKRF 251
            ||.....|..:   ..:|:...|||||:|.|:..|.|:|:::|:...:...|: .:...||...|
Human   235 PDQAPEHISKDLYKSAFFYFEGTFYNDKRYPECRDLSRTIIEWSESHDRGYGK-FQTARMEDFTF 298

  Fly   252 IDLTVSPGSPLHYLHHGNCEHLFVISQVEVLTPLSKRPDRSLYPY---PHAFSTFNRRTCYMCGI 313
            .||.:..|.|..|.|.|:|||:.||:.:. |.......||:|||.   .|...|   |.|::|.:
Human   299 NDLCIKLGFPYLYCHQGDCEHVIVITDIR-LVHHDDCLDRTLYPLLIKKHWLWT---RKCFVCKM 359

  Fly   314 RSYSFIVNQSRRQLHDPSYLCRRCFLSFFY-VDGVKLGQFKAYRMYD 359
            .:..::.|.......||.:.|..||....| .:|.|||:|.||...|
Human   360 YTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKLGEFLAYPYVD 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp49NP_610357.1 SNAPC3 157..358 CDD:463506 68/207 (33%)
SNAPC3NP_001034786.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..82 4/18 (22%)
SNAPC3 202..405 CDD:463506 68/207 (33%)
Blue background indicates that the domain is not in the aligned region.

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