Protein Alignment Pbp49 and snpc-3.4

DIOPT Version :10

• Sequence 1: NP_610357.1
• Gene: Pbp49 / 35787
• FlyBaseID: FBgn0260398
• Length: 377
• Species: Drosophila melanogaster
• Sequence 2: NP_497807.1
• Gene: snpc-3.4 / 192054
• WormBaseID: WBGene00011367
• Length: 418
• Species: Caenorhabditis elegans
• Alignment Length: 406
• Identity: 100/406 - (24%)
• Similarity: 165/406 - (40%)
• Gaps: 82/406 - (20%)

  Fly    20 DYQKKISGTADEVPFFLQKNPV--LVDVSESCSLDLIESPDDSSIAVF-QPAADKCRPTF----- 76
            |:..|   |..|....:.||.:  :..|:|..||:.||  :.|::.:| :.::|.....|
 Worm    43 DFDSK---TEKEHEMEMWKNSLSYIQGVTEEESLEAIE--EVSNLDMFLEGSSDVQTRRFEDMKG 102

  Fly    77 -------SPPQENQHVPSTFTALSQHK----DKSRKCPFGRTQYSHKLNPTPTDSPNLHIDACGE 130
                   ||...::||      :|:.|    .:.||..:..:....|.......:.:|....|..
 Worm   103 DRKFLERSPLVSHKHV------ISREKTMKTSRQRKSAYVTSLKYDKYMLNAGANTSLFHPQCSI 161

  Fly   131 LE-------LTVRLYRPPRAYH--------RGFKVEIPVFAEEFVCLGSNYLTELRDKISCVCNG 180
            ||       |.|....|   |:        |..::..|:  .:|:..|...|::||.|.  ||..
 Worm   162 LEKCEDDIVLIVDALMP---YNRELLSSELRSSRLLKPM--TKFLVRGDTLLSDLRQKF--VCQS 219

  Fly   181 KRFVDISDDPDAPLPSIDT------NPGYFFINDTFYNDQRNPDNPDYSKTVLQWAARANGVNGE 239
            ...|.:.:..:...|::|.      ...:.|::||||.|. .|:..|.|..:..:.......  :
 Worm   220 DTIVPLENGLELDPPNLDNATAVRFPSSFIFVHDTFYVDM-PPNAIDISHPIRNFMLHREIY--D 281

  Fly   240 TLKVESMEGKRFIDLTVSPGSPLHYLHHGNCEHLFVISQVEVLTP-----LSKRPDRSLYPYPHA 299
            .::..||||.|.|||.:..|.|..:.|.||||||.|...:.:|..     :.|      ||:. .
 Worm   282 PVEACSMEGVRIIDLKLRLGQPYIFQHSGNCEHLLVFHDLRLLHESDPWGIDK------YPFT-L 339

  Fly   300 FSTFNRRTCYMCGIRSYSFIVNQSRRQLHDPSYLCRRCFLSFFYVDGVKLGQFKAYRMYDHVELE 364
            :...|.:.|.:|......|:|.:.....:..::.||.||..|.||.|||...|.|   :.:.||:
 Worm   340 YEKGNEKKCDICKKGHVEFVVERHELLPNTYTHFCRTCFQEFNYVHGVKTHSFIA---WPYTELQ 401

  Fly   365 -GEEE-----DIKQQN 374
             ||:.     |.:|::
 Worm   402 TGEQRGWPFGDFEQED 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pbp49	NP_610357.1	SNAPC3	157..358	CDD:463506	59/211 (28%)
snpc-3.4	NP_497807.1	SNAPC3	200..398	CDD:463506	59/212 (28%)