DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and SOCS6

DIOPT Version :9

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_004223.2 Gene:SOCS6 / 9306 HGNCID:16833 Length:535 Species:Homo sapiens


Alignment Length:155 Identity:59/155 - (38%)
Similarity:88/155 - (56%) Gaps:7/155 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 EMLNQVWYWGEISRRDSQRQLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLEYRDNFWHF 247
            ::..|.||||.|:|.:::.:|::.|.||||||||.......:||||....|||.|:|:.:..:.|
Human   378 KLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSF 442

  Fly   248 EELK----YESIVEMIEDILHRCTNDNFVCFVKVPNEMQPPFPVILKYPLSRYSNMPKLQDLCRR 308
            .|..    :.|||::||..:....|..| |:.:........:||.|..|:||:..:..||.|||.
Human   443 YEQPDVEGHTSIVDLIEHSIRDSENGAF-CYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRF 506

  Fly   309 VLQRQMSREQLAQ-LPVPAQMLEYL 332
            |: ||.:|..|.| ||:|.:|.:||
Human   507 VI-RQYTRIDLIQKLPLPNKMKDYL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 32/81 (40%)
SOCS 293..333 CDD:295349 19/41 (46%)
SOCS6NP_004223.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..105
SH2_SOCS6 373..472 CDD:198250 35/94 (37%)
SOCS_SOCS6 495..535 CDD:239709 17/37 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142950
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3554
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.770

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