DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and Sla2

DIOPT Version :10

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_011238147.1 Gene:Sla2 / 77799 MGIID:1925049 Length:274 Species:Mus musculus


Alignment Length:196 Identity:39/196 - (19%)
Similarity:69/196 - (35%) Gaps:61/196 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 HSPNQIMYKACSEMLNQVWYWGEISRRDSQR--QLSDKPTGSFLVRDSET--------------- 218
            |.|:..:.|..     ..|.:..:||..::.  .|...|.|:||:|:|:|               
Mouse    80 HMPSVYVAKVA-----HGWLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGLSLYLDPPWTLS 139

  Fly   219 SGSQFTLSFRIVNVT-----LHYRLEYRDNFWHF--EELKYESIVEMIEDILHRCTNDNFVCFVK 276
            |...::||.|:....     .|||::..||.|.:  ..|.:.|:..::|......  |...|.::
Mouse   140 SLGCYSLSVRLSRPASWDRIRHYRIQRLDNGWLYISPRLTFPSLHALVEHYSELA--DGICCPLR 202

  Fly   277 VPNEMQP--PFPVILKYPLSRYSNMPKLQDLCRRVLQRQMSREQLAQLPVPAQMLEYLSVERELV 339
            .|..:|.  |.|                            .::....:.||...|.:..::|.|:
Mouse   203 EPCVLQKLGPLP----------------------------GKDTPPPVTVPTSSLNWKKLDRSLL 239

  Fly   340 F 340
            |
Mouse   240 F 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 24/101 (24%)
SOCS 293..333 CDD:470605 3/39 (8%)
Sla2XP_011238147.1 SH3 35..89 CDD:473055 2/8 (25%)
SH2 82..200 CDD:472789 27/124 (22%)

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