DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and Socs5

DIOPT Version :10

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_062628.2 Gene:Socs5 / 56468 MGIID:2385459 Length:536 Species:Mus musculus


Alignment Length:482 Identity:102/482 - (21%)
Similarity:169/482 - (35%) Gaps:174/482 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QSQNQSSQRSQAL-------TGGGDSP------RDREKEKKGW----FHSLTRRKKSDSALAVTA 53
            ::||.:::..|.:       :..|.:|      ||.......|    .||.:  .|:.|:|....
Mouse    78 RNQNCAAEIPQVVEISIEKDSDSGATPGTRLARRDSYSRHAPWGGKKKHSCS--TKTQSSLDTEK 140

  Fly    54 SAAVSTSGSQNNNNEVCVLEAADSSMASCSNGGTGTGTLRRR-------------RDKDKRNVFA 105
            ....:.||.|.......|....|  |.|.|:...|:.:||:|             ..|..:.:|:
Mouse   141 KFGRTRSGLQRRERRYGVSSMQD--MDSVSSRAVGSRSLRQRLQDTVGLCFPMRTYSKQSKPLFS 203

  Fly   106 RLRRKVGQGLSSL--------------RNWH------------------------SMGDCDDG-- 130
            . :||:  .||.|              :.||                        |..|.:|.  
Mouse   204 N-KRKI--HLSELMLEKCPFPAGSDLAQKWHLIKQHTAPVSPHSTFFDTFDPSLVSTEDEEDRLR 265

  Fly   131 -------------------GTTDATYEF-----LTPAICPEPT--------LPFTHD-------- 155
                               .|.:||.:.     |.|.:.|..|        :|.|:.        
Mouse   266 ERRRLSIEEGVDPPPNAQIHTFEATAQVNPLYKLGPKLAPGMTEISGDGSAIPQTNCDSEEDSTT 330

  Fly   156 -YLRFIRKKWLERE---DAHS----------PNQIMYKAC-----SEMLNQVWYWGEISRRDSQR 201
             .|:..|:|  :|:   |:|:          ..||.|..|     .::.....|||.:.|.:::.
Mouse   331 LCLQSRRQK--QRQVSGDSHAHVSRQGAWKVHTQIDYIHCLVPDLLQITGNPCYWGVMDRYEAEA 393

  Fly   202 QLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLEYRDNFWHFEELKYESIVEMIED--ILH 264
            .|..||.|:||:|||......|::|||..|.:||.|:|..::.:.|:          ..|  :.|
Mouse   394 LLEGKPEGTFLLRDSAQEDYLFSVSFRRYNRSLHARIEQWNHNFSFD----------AHDPCVFH 448

  Fly   265 RCTNDNFVCFVKVPNE---MQPPFPVILK--YPLSRYSNMPKLQDLCRRVLQRQMSREQLAQLPV 324
            ..|....:...|.|:.   .:|...:.|.  :|.|       ||.:||.|:.|..:.:.:..||:
Mouse   449 SSTVTGLLEHYKDPSSCMFFEPLLTISLNRTFPFS-------LQYICRAVICRCTTYDGIDGLPL 506

  Fly   325 PAQMLEYLS------------VERELV 339
            |:.:.::|.            :|||.|
Mouse   507 PSMLQDFLKEYHYKQKVRVRWLEREPV 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 25/79 (32%)
SOCS 293..333 CDD:470605 10/39 (26%)
Socs5NP_062628.2 Required for interaction with IL4R 1..50
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..59
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..175 19/83 (23%)
SOCS 145..195 CDD:432667 12/51 (24%)
SH2 370..470 CDD:472789 28/109 (26%)
SOCS_SOCS5 479..534 CDD:239708 16/62 (26%)
Blue background indicates that the domain is not in the aligned region.

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