DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and socs7

DIOPT Version :9

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_009304138.1 Gene:socs7 / 556903 ZFINID:ZDB-GENE-080204-125 Length:777 Species:Danio rerio


Alignment Length:414 Identity:110/414 - (26%)
Similarity:167/414 - (40%) Gaps:109/414 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHGDQSQNQSSQRS--QALTGGGDSPRDREKEKKGWFHSLTRRKKSDSALAVTASAAVSTSGSQN 64
            |.....:.:||.|:  .|.:||..:.:...|.:||             :|.:..|....|.....
Zfish   357 SQASTPKARSSSRAHLSAASGGEKTLKVPGKSRKG-------------SLKIRLSKLFRTKSCSG 408

  Fly    65 NNNEVCVLEAADSSMASCSNGGT---GTGTLRRRRDKDKRNVFARLRRK----------VGQGLS 116
            :||   :|:...|...|.|:.|:   .:|.:...:|...:....|.:..          .|:.:|
Zfish   409 SNN---LLDKRPSVTFSISSAGSLVDMSGAIGGEQDTSSQPGLTRAQSAFSAASFTPVFTGETVS 470

  Fly   117 SL--------RN-----------WHSMGDCDD-GG---------TTDATYEFLTPAICPEPTLPF 152
            .:        ||           ..|:...|| ||         ...|:.:.|...:.|.|.|..
Zfish   471 LVDVDISQRGRNSPHPPTPPPPPRRSLSLLDDIGGPQPGPFLVSVMGASLQSLPLPLPPPPPLHA 535

  Fly   153 THDYLRFIRKKWLEREDA------HS--------------PNQIM----------YKACSEMLNQ 187
            |..:.       |...||      ||              |.|:|          :.|....|.:
Zfish   536 TIQHS-------LSLNDAFFRALPHSAASPMENPAPARLAPPQVMCPLRGADSSSFTASLRELER 593

  Fly   188 V-WYWGEISRRDSQRQLSDKPTGSFLVRDSETSGSQFTLSFRIVNVTLHYRLE-YRDNF--W--- 245
            . ||||.::..|::.:|..||.||||||||.......:||||...||.|.|:| ||..|  |   
Zfish   594 CGWYWGPMNWEDAEMKLRGKPDGSFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFSLWCHP 658

  Fly   246 HFEELKYESIVEMIEDILHRCTNDNFVCFV--KVPNEMQPPFPVILKYPLSRYSNMPKLQDLCRR 308
            .||: :..|:||.||..:....|..|:.|:  :||.  .||.||.|.||:||:||:..||.|||.
Zfish   659 KFED-RCHSVVEFIERAIMHSKNGKFLYFLRSRVPG--LPPTPVQLLYPVSRFSNVKSLQHLCRF 720

  Fly   309 VLQRQMSREQLAQLPVPAQMLEYL 332
            .:::.:..:.:.:||:|..::.||
Zfish   721 CIRQLVRIDHIQELPLPKPLIVYL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 36/84 (43%)
SOCS 293..333 CDD:295349 14/40 (35%)
socs7XP_009304138.1 SH2_SOCS7 585..685 CDD:198251 40/100 (40%)
SOCS_SOCS7 709..757 CDD:239710 12/36 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10155
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3554
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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