DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and Pik3r2

DIOPT Version :9

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_038950364.1 Gene:Pik3r2 / 29741 RGDID:68341 Length:741 Species:Rattus norvegicus


Alignment Length:248 Identity:62/248 - (25%)
Similarity:100/248 - (40%) Gaps:51/248 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 GQGLSSLRNWHSMGDCDDGGTTDATYEFLTPAICP--EPTLPFTHDYLRFIRKKWLERED----A 170
            |.|..:.|:.||              :.|||.:.|  ||...|....|..:.::.::.:|    |
  Rat   264 GDGPHTWRSCHS--------------QALTPLLAPRSEPAPDFPVLLLERLVQEHVDEQDTAPPA 314

  Fly   171 HSPNQIMYKACSEML----------NQVWYWGEISRRDSQRQLSDKPTGSFLVRDSETS-GSQFT 224
            ..|.....|.....|          :..||||:|||.:...:|.|.|.|:|||||:.:. ..::|
  Rat   315 LPPKPSKVKPAPTALANGGSTPSLQDAEWYWGDISREEVNERLRDTPDGTFLVRDASSKIQGEYT 379

  Fly   225 LSFRIVNVTLHYRLEYRDNFWHFEE-LKYESIVEMIEDILHRCTNDNFVCFVKVPNEMQPPFPVI 288
            |:.|........::.:||..:.|.| |.:.|:||:|....|...           .:........
  Rat   380 LTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVVELISHYRHESL-----------AQYNAKLDTR 433

  Fly   289 LKYPLSRYSNMPKLQDLCRRVLQRQMSREQLAQLPVPAQMLEYLSVERELVFQ 341
            |.||:|:|.     ||   :|::........|||.|..|..:..|.|.:.:::
  Rat   434 LLYPVSKYQ-----QD---QVVKEDSVEAVGAQLKVYHQQYQDKSREYDQLYE 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 29/79 (37%)
SOCS 293..333 CDD:295349 10/39 (26%)
Pik3r2XP_038950364.1 SH3_PI3K_p85beta 7..80 CDD:212842
RhoGAP 110..321 CDD:413382 16/70 (23%)
SH2_nSH2_p85_like 337..445 CDD:198195 36/126 (29%)
iSH2_PIK3R2 450..610 CDD:214019 7/29 (24%)
SH2_cSH2_p85_like 628..730 CDD:198184
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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