DRSC/TRiP Functional Genomics Resources

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Protein Alignment Socs44A and Tnp2

DIOPT Version :10

Sequence 1:NP_523659.1 Gene:Socs44A / 35786 FlyBaseID:FBgn0033266 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_038722.3 Gene:Tnp2 / 21959 MGIID:98785 Length:117 Species:Mus musculus


Alignment Length:82 Identity:16/82 - (19%)
Similarity:30/82 - (36%) Gaps:18/82 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 HSMGDCDDGGTTDATYEFLTPAICPEPTLPFTHDYLRFIRKKWLEREDAHSPNQIMYK-ACSEML 185
            |....|...|...::..       |.|..|..|.....        ...|||.:..:: :|.:  
Mouse    36 HHCRSCSQAGHAGSSSS-------PSPGPPMKHPKPSV--------HSRHSPARPSHRGSCPK-- 83

  Fly   186 NQVWYWGEISRRDSQRQ 202
            |:..:.|::|:|.:.|:
Mouse    84 NRKTFEGKVSKRKAVRR 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Socs44ANP_523659.1 SH2_SOCS_family 188..266 CDD:198178 4/15 (27%)
SOCS 293..333 CDD:470605
Tnp2NP_038722.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..117 16/82 (20%)
TP2 1..113 CDD:426159 16/82 (20%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P11101 90..98 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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