DRSC/TRiP Functional Genomics Resources

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Protein Alignment coil and LOC3292006

DIOPT Version :10

Sequence 1:NP_001014505.1 Gene:coil / 35785 FlyBaseID:FBgn0033265 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_553370.2 Gene:LOC3292006 / 3292006 VectorBaseID:AGAMI1_007220 Length:319 Species:Anopheles gambiae


Alignment Length:493 Identity:85/493 - (17%)
Similarity:158/493 - (32%) Gaps:195/493 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VDLSNFFKDERRNSLVFIDAAWNNIKDLQDHIQNLFSL-KDISLLTSDGCYLPPRESIKVLNSAE 71
            :|||..:.|.|:.:.:....:|..:..|...:|:.|.: .|:.:.:.||.:.|..|::.::    
Mosquito     7 LDLSALYSDHRQKAYIGYRTSWTTVGCLIRTVQDTFGIASDLYVCSEDGIFYPECENVGLI---- 67

  Fly    72 GLKAFRFASHDSDTF-VSPAPVKSSKKRKNRSVEEQVHLTASTPLRPSKRSKNQNNSEWINIAEN 135
                     ||.:|. :.|.....|:||.|...:::       |.:.:..:..|.:|.:      
Mosquito    68 ---------HDGETLRILPKAHVESRKRSNTVSDDE-------PRKRTAANAQQESSTY------ 110

  Fly   136 PSRVRKKELLDMAPGPSVQSKLLTNKGTPKAPETQTEVSNMSANIETENKESAPQIKNKSKNKKP 200
                           ..::|.||   |.||                       |:.:...|.|..
Mosquito   111 ---------------EDIESTLL---GLPK-----------------------PKRRRIRKRKSK 134

  Fly   201 TKSPEASDQVENEPAPKSISRCTLKEGKMSESKNQETSPDILSEKSGVVTKENETREEQQDKTHL 265
            |   ...:|..::|.|                    ::|  :.:.:|..|:....|         
Mosquito   135 T---IVEEQQPSQPVP--------------------SAP--IQQPTGDETQNGHVR--------- 165

  Fly   266 ESNKIPDKLSQLKAGDQIEKSPGIAASLLSISFRSPLLEMPF-NVPRIFQFPTKKQQIEILEYKK 329
                .||:.||...|......|                |:|: |:.|     |.|.::       
Mosquito   166 ----FPDEESQSSEGKASSDDP----------------ELPYRNLNR-----TMKARV------- 198

  Fly   330 LKPISPRFL------------LQKGAKSDDTAKQFPSNGKDSTLKPKSYEILHDEELPDVKDKKN 382
            ::.:||..|            ...|:..|....:.|:...:.:|||:....|..|         |
Mosquito   199 VRAVSPSSLTIQPPSGIPSEHANNGSAEDTHTTEPPARTSNPSLKPRIVRALRPE---------N 254

  Fly   383 VSEGIKRAVAPLCEDIIETSTTLPGAIGAVESAYLDNSTEAETTLPSEAEATNPLELTESFLQNN 447
            .:..:||       :::|.:...    .||.:|.|..|...:|                  :|.|
Mosquito   255 ATVQVKR-------ELLEAAHVK----AAVAAAALQQSCPPQT------------------VQQN 290

  Fly   448 TSMEKTPKVEKILPDDGSASPIKNNVDSKDVKTVTVPI 485
                 ||.:|.    |...:|:.....::|..||.:.:
Mosquito   291 -----TPIIEL----DSQPTPVPGEEATRDAGTVILAV 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coilNP_001014505.1 Coilin_N 8..125 CDD:464910 23/118 (19%)
LOC3292006XP_553370.2 None

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