Sequence 1: | NP_610355.1 | Gene: | Nup50 / 35784 | FlyBaseID: | FBgn0033264 | Length: | 564 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001247302.1 | Gene: | Nup358 / 43041 | FlyBaseID: | FBgn0039302 | Length: | 2718 | Species: | Drosophila melanogaster |
Alignment Length: | 738 | Identity: | 162/738 - (21%) |
---|---|---|---|
Similarity: | 262/738 - (35%) | Gaps: | 225/738 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 EERGTFRTATEEELKTRVIKKARRKIAGGSSAA----------------------EEDGAEEKTA 65
Fly 66 EP-----KSVFSGFSGFGKPAAS-PAAGSP---FSFLANVTAPATTSSSEPKKSAFSFGFSSSSS 121
Fly 122 SADRPVSTSICGTASTSSTA--------PSPLPAKESTSTVDGAKPTTSIFGNIS-------AAK 171
Fly 172 KESSEAKTSSSSTSLTSTMETSEYRE----------SVADLNRSVIKFLQDQMGKSPYCI---LT 223
Fly 224 PVFK-NYDEHLK--------DLQDEESARTNSTKSKTAQARSQ-------EPVAKVSRA--SSPP 270
Fly 271 KAATTFTFGKPSAPI---GASVSPLAKKPNC--TITSGG-----------TTTTTATPLVS---F 316
Fly 317 GSTASFTAPVPSSSSIFSLTAKPTGEAKSDDTPKSSIFSFGAKDTTTKKDEP-------NFSAP- 373
Fly 374 -------------KTNGFSFGLK---------------------------SNND----------- 387
Fly 388 --DKPSTSLFA-GFGKAPGG----AGDGAKGFSFT-------------NSATPFSLGNIHP---- 428
Fly 429 PAAAAAPAE--------EEKEEDT--------PPKVEFKQVVED-DAIYSKRCKVFIKKDKDFGD 476
Fly 477 RGVGTLYLKPVKDSEKIQLLVRADTNLGNILVNLILSKGIPCQRMGKNNVLMVCVPTPEDSKATS 541
Fly 542 LL----LRVKTGDEADDLLEKIK 560 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup50 | NP_610355.1 | NUP50 | 4..80 | CDD:312461 | 15/83 (18%) |
RanBD_NUP50 | 453..563 | CDD:269991 | 23/113 (20%) | ||
Nup358 | NP_001247302.1 | TPR | <14..128 | CDD:223533 | |
TPR repeat | 58..90 | CDD:276809 | |||
Atrophin-1 | <1030..1308 | CDD:331285 | |||
RanBD1_RanBP2_insect-like | 1324..1442 | CDD:269992 | 4/10 (40%) | ||
RanBD2_RanBP2_insect-like | 1620..1737 | CDD:269993 | 25/122 (20%) | ||
RanBP2-type Zn finger | 1774..1793 | CDD:275376 | 4/18 (22%) | ||
Nucleoporin_FG2 | 1806..>1986 | CDD:330420 | 47/190 (25%) | ||
RanBP2-type Zn finger | 1833..1861 | CDD:275375 | 8/29 (28%) | ||
zf-RanBP | 1891..1917 | CDD:279035 | 0/25 (0%) | ||
RanBP2-type Zn finger | 1894..1913 | CDD:275376 | 0/18 (0%) | ||
RanBD3_RanBP2_insect-like | 2034..2148 | CDD:269994 | 23/114 (20%) | ||
RanBD4_RanBP2_insect-like | 2571..2694 | CDD:269995 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR23138 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |